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Protein

DNA-directed RNA polymerase subunit

Gene

1277585

Organism
Anopheles gambiae (African malaria mosquito)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri84 – 126TFIIS-typePROSITE-ProRule annotationAdd BLAST43

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunitUniRule annotation
Gene namesi
Name:1277585Imported
OrganismiAnopheles gambiae (African malaria mosquito)Imported
Taxonomic identifieri7165 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraNematoceraCulicoideaCulicidaeAnophelinaeAnopheles

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotation, NucleusUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini84 – 126TFIIS-typeInterPro annotationAdd BLAST43

Sequence similaritiesi

Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.UniRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri84 – 126TFIIS-typePROSITE-ProRule annotationAdd BLAST43

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

OMAiETRMILF.

Family and domain databases

CDDicd10508. Zn-ribbon_RPB9. 1 hit.
InterProiView protein in InterPro
IPR019761. DNA-dir_RNA_pol-M_15_CS.
IPR001529. DNA-dir_RNA_pol_M/15kDasu.
IPR012164. Rpa12/Rpb9/Rpc10/TFS.
IPR034012. Zn_ribbon_RPB9_C.
IPR001222. Znf_TFIIS.
PfamiView protein in Pfam
PF02150. RNA_POL_M_15KD. 1 hit.
PF01096. TFIIS_C. 1 hit.
PIRSFiPIRSF005586. RNApol_RpoM. 1 hit.
SMARTiView protein in SMART
SM00661. RPOL9. 1 hit.
SM00440. ZnF_C2C2. 1 hit.
PROSITEiView protein in PROSITE
PS01030. RNA_POL_M_15KD. 1 hit.
PS00466. ZF_TFIIS_1. 1 hit.
PS51133. ZF_TFIIS_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1S4GY48-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYDAAHDDG PGFVGIRFCQ ECNNMLYPKE DKENKILLYA CRNCDYKQEA
60 70 80 90 100
DSNCIYVNKI MHEIDELTHI VPDVISDPTL PRTEEHACPK CSHREAVFFQ
110 120
AQTRRAEEEM RLYYVCTNSS CCHRWTE
Length:127
Mass (Da):14,860
Last modified:April 12, 2017 - v1
Checksum:iE97E1E117CBE8A8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAAB01008964 Genomic DNA. No translation available.

Genome annotation databases

EnsemblMetazoaiAGAP008393-RA; AGAP008393-PA; AGAP008393.
VectorBaseiAGAP008393-RA; AGAP008393-PA; AGAP008393.

Similar proteinsi

Entry informationi

Entry nameiA0A1S4GY48_ANOGA
AccessioniPrimary (citable) accession number: A0A1S4GY48
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: March 28, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)