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Protein

Transporter

Gene

LOC106589096

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Biological processSymportUniRule annotationSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
TransporterUniRule annotation
Gene namesi
Name:LOC106589096Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei41 – 58HelicalSequence analysisAdd BLAST18
Transmembranei70 – 92HelicalSequence analysisAdd BLAST23
Transmembranei113 – 141HelicalSequence analysisAdd BLAST29
Transmembranei193 – 210HelicalSequence analysisAdd BLAST18
Transmembranei222 – 242HelicalSequence analysisAdd BLAST21
Transmembranei271 – 292HelicalSequence analysisAdd BLAST22
Transmembranei304 – 325HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

InterProiView protein in InterPro
IPR000175. Na/ntran_symport.
PANTHERiPTHR11616. PTHR11616. 1 hit.
PfamiView protein in Pfam
PF00209. SNF. 1 hit.
PRINTSiPR00176. NANEUSMPORT.
PROSITEiView protein in PROSITE
PS00610. NA_NEUROTRAN_SYMP_1. 1 hit.
PS00754. NA_NEUROTRAN_SYMP_2. 1 hit.
PS50267. NA_NEUROTRAN_SYMP_3. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1S3Q2Y4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFPKLPNPG LDDRIPSHKE LERMEKEEAG DRPKWDNKTQ YMLTCVGFCV
60 70 80 90 100
GLGNVWRFPY LCQSHGGGAF MIPFLILLVL EGIPLLHLEF AIGQRLRSGS
110 120 130 140 150
VGVWGSVNPY LTGIGIASML VSFLVGMYYN TIMAWIMWYL FNSFQDPLPW
160 170 180 190 200
SQCPLNANKT GLVSECARSS SVDYFWYRET LNTSTAIDLS GGLQWWMVLA
210 220 230 240 250
LVSAWTLLYV CCIRGIETTG KAVYITSTLP YLVLTIFLIR GLTLKGSLDG
260 270 280 290 300
IKFLFTPDVN ELMNPSTWLD AGAQVFYSFS LAFGGLISFS SYNSVHNNCE
310 320 330 340 350
QDAVIISVIN GATSVYSATV IYSIIGFRAT EKFDDCSDGN IMTLVNVFSS
Length:350
Mass (Da):38,979
Last modified:April 12, 2017 - v1
Checksum:i8BFCEC9294C89E2C
GO

Sequence databases

RefSeqiXP_014034261.1. XM_014178786.1.
XP_014034262.1. XM_014178787.1.

Genome annotation databases

GeneIDi106589096.

Similar proteinsi

Entry informationi

Entry nameiA0A1S3Q2Y4_SALSA
AccessioniPrimary (citable) accession number: A0A1S3Q2Y4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: August 30, 2017
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported