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Protein
Submitted name:

myocyte-specific enhancer factor 2D isoform X2

Gene

mef2d

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
myocyte-specific enhancer factor 2D isoform X2Imported
Gene namesi
Name:mef2dImported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR022102 HJURP_C
IPR033896 MADS_MEF2-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF12347 HJURP_C, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S3NQ64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKKIQIQR ITDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNH
60 70 80 90 100
SNKLFQYAST DMDKVLLKYT EYNEPHESRT NVDIMETLRK KGFNGCNSPE
110 120 130 140 150
PEGDDSIDQS PLNDDKYRKN EDLDILFKRY GSAVPQPTFS MPVTVPVSNQ
160 170 180 190 200
NALQFSNSGG LVTTSFVTST LTDPRLLSPQ QPSLQRNTGS PGLPQRPASA
210 220 230 240 250
GALLGGELNN SNGGCPSPVP NGYISARASP GLLSVSNGNS LGKVAKSPPP
260 270 280 290 300
PSPQMVNSRK PDLRVITSQS GKSLMQLTDE ELELVSENAQ RLGGSQGNLS
310 320 330 340 350
TPVVSVATPS LLAPFSAMQT TYNTEYQLTS ADLTALQTFT PSGLLPSNMS
360 370 380 390 400
TWQQQPAVSQ QQQQQQQQQH QQQQQISLAS LSNLVMWGAE KQNGEMANCI
410 420 430 440 450
SNFAANLSMA SQSNLLFGRE EGLCWPVGHL PQGTMLTINT NPNISIKSEP
460 470 480 490 500
VSPNRDRSTP CSTAGGGGGG GLVTITGAPM SGQYPGALRL EPSTLQGRSP
510 520 530 540 550
VGSLSSNGSS YEGDRDDGAQ GRAQDFHHQV GASSGMGLLR PSSTQEQQEQ
560
EGANVKRMRL DTWVT
Length:565
Mass (Da):60,968
Last modified:April 12, 2017 - v1
Checksum:i55BB4685E948D46A
GO

Sequence databases

RefSeqiXP_014017529.1, XM_014162054.1

Genome annotation databases

GeneIDi106580711

Similar proteinsi

Entry informationi

Entry nameiA0A1S3NQ64_SALSA
AccessioniPrimary (citable) accession number: A0A1S3NQ64
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: March 28, 2018
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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