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Protein
Submitted name:

keratin, type II cytoskeletal 5 isoform X4

Gene

Krt5

Organism
Dipodomys ordii (Ord's kangaroo rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
keratin, type II cytoskeletal 5 isoform X4Imported
Gene namesi
Name:Krt5Imported
OrganismiDipodomys ordii (Ord's kangaroo rat)Imported
Taxonomic identifieri10020 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaHeteromyidaeDipodomyinaeDipodomys
Proteomesi
  • UP000081671 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 160Keratin_2_headInterPro annotationAdd BLAST145

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili233 – 267Sequence analysisAdd BLAST35
Coiled coili375 – 455Sequence analysisAdd BLAST81

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Family and domain databases

InterProiView protein in InterPro
IPR001664. IF.
IPR018039. Intermediate_filament_CS.
IPR032444. Keratin_2_head.
IPR003054. Keratin_II.
PANTHERiPTHR23239. PTHR23239. 1 hit.
PfamiView protein in Pfam
PF00038. Filament. 1 hit.
PF16208. Keratin_2_head. 1 hit.
PRINTSiPR01276. TYPE2KERATIN.
SMARTiView protein in SMART
SM01391. Filament. 1 hit.
PROSITEiView protein in PROSITE
PS00226. IF. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1S3GGA2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRQSSVSFR SGGSRSFSAA SAITPSVSRT SFTSVSRSGG GGGGSRISFG
60 70 80 90 100
GVSGLGSYGS RSLYNVGSSK RISINSGGGA FRGRSIGGAG AGYGFGSGAG
110 120 130 140 150
GGFGFGAGFG GGAGFGGGYG GGFGGPGFPV CPPGGIQEVT INQSLLTPLN
160 170 180 190 200
LEIDPTIQRV RTEEREQIKT LNNKFASFID KVRFLEQQNK VLDTKWTLLQ
210 220 230 240 250
EQGTKTVRQN LEPLFEQYIN NLRRQLDGVL GERGRLDSEL RNMQDLVEDF
260 270 280 290 300
KNKYEDEINK RTTAENEFVM LKKDVDAAYM NKVELEAKVD ALMDEINFLK
310 320 330 340 350
MFFDAELSQM QTHISDTSVV LSMDNNRSLD LDSIIAEVKA QYEDIANRSR
360 370 380 390 400
TEAESWYQTK YEELQQTAGR HGDDLRNTKH EISEMNRMIQ RLRAEIDNVK
410 420 430 440 450
KQCANLQNAI ADAEQRGELA LKDARNKLTE LEEALQKAKQ DMARLMRDYQ
460 470 480 490 500
ELMNVKLALD VEIATYRKLL EGEECRLSGE GVGPVNISVV TNSLSSGYGG
510 520 530 540 550
SSFGGGGIGG GGGSGSYYSS SSGGMGGGGG LGGGLSVGGS GFSASSGRGI
560 570
GGGSSSSVKF VSTTSSSRRS FKS
Length:573
Mass (Da):61,077
Last modified:April 12, 2017 - v1
Checksum:iEE1A6885174909E4
GO

Sequence databases

RefSeqiXP_012887893.1. XM_013032439.1.

Genome annotation databases

GeneIDi105997891.

Similar proteinsi

Entry informationi

Entry nameiA0A1S3GGA2_DIPOR
AccessioniPrimary (citable) accession number: A0A1S3GGA2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: August 30, 2017
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported