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Protein
Submitted name:

optineurin isoform X1

Gene

Optn

Organism
Dipodomys ordii (Ord's kangaroo rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
optineurin isoform X1Imported
Gene namesi
Name:OptnImported
OrganismiDipodomys ordii (Ord's kangaroo rat)Imported
Taxonomic identifieri10020 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaHeteromyidaeDipodomyinaeDipodomys
Proteomesi
  • UP000081671 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini544 – 574CCHC NOA-typeInterPro annotationAdd BLAST31

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili44 – 64Sequence analysisAdd BLAST21
Coiled coili76 – 117Sequence analysisAdd BLAST42
Coiled coili133 – 167Sequence analysisAdd BLAST35
Coiled coili234 – 268Sequence analysisAdd BLAST35
Coiled coili307 – 334Sequence analysisAdd BLAST28
Coiled coili345 – 372Sequence analysisAdd BLAST28
Coiled coili417 – 451Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Family and domain databases

InterProiView protein in InterPro
IPR032419 CC2-LZ_dom
IPR021063 NEMO_N
IPR034735 NEMO_ZF
IPR032939 Optineurin
PANTHERiPTHR31553:SF2 PTHR31553:SF2, 1 hit
PfamiView protein in Pfam
PF16516 CC2-LZ, 1 hit
PF11577 NEMO, 1 hit
PROSITEiView protein in PROSITE
PS51801 ZF_CCHC_NOA, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S3F1X8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSHQSWSYLS EKGDSPSETP GNGPPSLAHP SLETFTPEEL LQQMKELLAE
60 70 80 90 100
NHQLKEAMKL NNQAMKGRFE ELSAWTEKQK EERQLFEIQY KEVKERLMAM
110 120 130 140 150
SHENEKLKEE LGKLKGKPER PFEDPSTDFI LPKAEVEQEV QQLKTQVARL
160 170 180 190 200
QAEKADLLGI VSELQLKLNS STSSEDSFVE IRVTEEAADG TIKEMKNSSG
210 220 230 240 250
PTRTDSIDMN KSVEGARNYA EFEELTVSQL LLCLREGNQK VERLEIALKE
260 270 280 290 300
AKERISEFEK KADNHSETET QTEGSTEKEN EEETGTETIG SEVQALNLQL
310 320 330 340 350
TSLFKELQEA HIKLSEAELM KKRLQEKCQA LERKYSATPL ELNEKQELVY
360 370 380 390 400
NNKKLELQVE SMRSEIKMEQ ARTEDEKSKL ATLQSTYGQL LQDYDNALIV
410 420 430 440 450
IEQLTKSESE KVDKVLLQEL NEKLDLAERA LASKQLQMDE MKQIIAKQEE
460 470 480 490 500
DLETMAVLRA QMEVYCSDFH AERAAREKIH EEKEQLALQL AFVLKENNAF
510 520 530 540 550
EDGSSRQSLM EMQSRHGART NDPDQQVYLV QRGAEERNWR QPQPQSIPIH
560 570
SCPKCGEVLP DIDTLQIHVM DCII
Length:574
Mass (Da):65,816
Last modified:April 12, 2017 - v1
Checksum:i56BD63EA8092EC6D
GO

Sequence databases

RefSeqiXP_012870164.1, XM_013014710.1

Genome annotation databases

GeneIDi105984504

Similar proteinsi

Entry informationi

Entry nameiA0A1S3F1X8_DIPOR
AccessioniPrimary (citable) accession number: A0A1S3F1X8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: December 20, 2017
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health