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Protein
Submitted name:

PDZ and LIM domain protein 4 isoform X1

Gene

PDLIM4

Organism
Erinaceus europaeus (Western European hedgehog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PDZ and LIM domain protein 4 isoform X1Imported
Gene namesi
Name:PDLIM4Imported
OrganismiErinaceus europaeus (Western European hedgehog)Imported
Taxonomic identifieri9365 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaInsectivoraErinaceidaeErinaceinaeErinaceus
Proteomesi
  • UP000079721 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 84PDZInterPro annotationAdd BLAST77
Domaini254 – 313LIM zinc-bindingInterPro annotationAdd BLAST60

Keywords - Domaini

LIM domainPROSITE-ProRule annotationSAAS annotation

Family and domain databases

InterProiView protein in InterPro
IPR031847. DUF4749.
IPR001478. PDZ.
IPR036034. PDZ_sf.
IPR001781. Znf_LIM.
PfamiView protein in Pfam
PF15936. DUF4749. 1 hit.
PF00412. LIM. 1 hit.
PF00595. PDZ. 1 hit.
SMARTiView protein in SMART
SM00132. LIM. 1 hit.
SM00228. PDZ. 1 hit.
SUPFAMiSSF50156. SSF50156. 1 hit.
PROSITEiView protein in PROSITE
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.
PS50106. PDZ. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1S2ZIR7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPHSVTLRGP SPWGFRLVGG RDFSAPLTIS RVHAGSKAAL AALCPGDLIQ
60 70 80 90 100
AINGESTEFM THLEAQNRIK GCHDHLTLSV SRPEGRSWSS SPEDSKVQAH
110 120 130 140 150
RIHIDPDSQD GSPATSRRSS ASGIWPEDGR PSPGFPHGQS PHLPVPHNGT
160 170 180 190 200
SSEATLLTQM NNLHMSPPHS IDPARGLPRG RDCGIDLGSE VYRMLREPAE
210 220 230 240 250
PTATEPKQSG SFRYLQGILE AGEGGERPGP GGPRNLKPTA SKLGAPLTGL
260 270 280 290 300
QGLPECVRCG HGIVGTIVKA RDKLYHPECF MCSDCGLNLK QRGYFFLDER
310 320 330
LYCENHAKAR VKPPEGYDVV AVYPNAKVEL V
Length:331
Mass (Da):35,719
Last modified:April 12, 2017 - v1
Checksum:i69C0695C832FF779
GO

Sequence databases

RefSeqiXP_007519992.1. XM_007519930.1.

Genome annotation databases

GeneIDi103110756.

Similar proteinsi

Entry informationi

Entry nameiA0A1S2ZIR7_ERIEU
AccessioniPrimary (citable) accession number: A0A1S2ZIR7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: October 25, 2017
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported