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Protein
Submitted name:

putative RNA exonuclease NEF-sp

Gene

LOC103107780

Organism
Erinaceus europaeus (Western European hedgehog)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionExonucleaseImported, Hydrolase, Nuclease, RNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
putative RNA exonuclease NEF-spImported
Gene namesi
Name:LOC103107780Imported
OrganismiErinaceus europaeus (Western European hedgehog)Imported
Taxonomic identifieri9365 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaInsectivoraErinaceidaeErinaceinaeErinaceus
Proteomesi
  • UP000079721 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini504 – 578RRMInterPro annotationAdd BLAST75
Domaini599 – 670RRMInterPro annotationAdd BLAST72

Family and domain databases

CDDicd06145 REX1_like, 1 hit
Gene3Di3.30.420.10, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR013520 Exonuclease_RNaseT/DNA_pol3
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034922 REX1-like_exo
IPR012337 RNaseH-like_sf
IPR036397 RNaseH_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00929 RNase_T, 1 hit
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00479 EXOIII, 1 hit
SM00360 RRM, 2 hits
SUPFAMiSSF53098 SSF53098, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

A0A1S2ZB41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPNGGEAWQ PPKKGEKRQR PSNQPVEAAP AMKAGCELEE RQPEVKKARL
60 70 80 90 100
SSTLLYKNCE ITHDQVCELL KYAVLGKSSI PKPSWCQLFH QNHLKKVVVF
110 120 130 140 150
VLEGMSQPHF YRYYLEFEFL RKAFTHKFCL PPPSLDFLCD IIGLQKQQIA
160 170 180 190 200
GDLSKPMEGS LSPTNPEGCS DLHRNPIIHK YGFNKVGLTR CLLTRQEMKI
210 220 230 240 250
FNFPLQDSLD FEDFAPTQCD GSVTDSSPLF GLDCEMCLTA EGHELTRVSL
260 270 280 290 300
VTEGGCCVMD ELVKPANKIE DYLTRFSGIT KEILKPVTTK LKDVQRKLQA
310 320 330 340 350
LLPPDAVLVG HSLDGDLKAL KMIHPYVIDT SLLYVRERGR RFKLKFLAKA
360 370 380 390 400
ILGKEIQCPY RFGHDSTEDA RTALELVQYF LRYGPRKIAD TDLETLVIHQ
410 420 430 440 450
DLLAADPGLS SSAHHPPNTS VLECLDSVSQ KLLFLTQETH DSELSSSSNC
460 470 480 490 500
QTIKCLSNKE VLKLAREKVP FFPFSVIHFS FEPFSPEHTE EMSKRMKVKW
510 520 530 540 550
AEMSAVYAGP FSQKCNRRDL KRLFKSFGPV QSMAFVLETY QPHLCVQYKV
560 570 580 590 600
LEAAQLAIET LDGTLVEGTC IKVQRPVTEL TLDSNTLVHE LEQDSENRGT
610 620 630 640 650
IYLAGVNKAF KEHLLQQSSH FSGLEALILP KDPQTGKQEK YCFLKFKTYS
660 670 680 690 700
NAKKALSILT GTDWKLKGRP GLTPRHLQTW LRNSPQESSL LGLHGVAYPS
710 720 730 740 750
EQQALQTLTL DHRKIAAWRW GRKIEKLYHS LCPGTLCLVL LPGTNSTNGS
760 770
FSGLGLMGIK DEEESTISNM HL
Length:772
Mass (Da):87,032
Last modified:April 12, 2017 - v1
Checksum:iA830A45AACB54CB6
GO

Sequence databases

RefSeqiXP_007516655.1, XM_007516593.1

Genome annotation databases

GeneIDi103107780

Similar proteinsi

Entry informationi

Entry nameiA0A1S2ZB41_ERIEU
AccessioniPrimary (citable) accession number: A0A1S2ZB41
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 28, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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