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Protein
Submitted name:

LysR family transcriptional regulator

Gene

BLN97_19180

Organism
Bradyrhizobium elkanii
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi23 – 42H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
LysR family transcriptional regulatorImported
Gene namesi
ORF Names:BLN97_19180Imported
OrganismiBradyrhizobium elkaniiImported
Taxonomic identifieri29448 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000181729 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

SMRiA0A1S2SJ55
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 63HTH lysR-typeInterPro annotationAdd BLAST58

Family and domain databases

CDDicd08462 PBP2_NodD, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR037416 NodD_PBP2
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S2SJ55-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFNGLDLNL LVALDALMTE RSLTAAARKI NLSQPAMSAA VARLRSYFRD
60 70 80 90 100
ELFAMRGRKL VPTSRAEGLA APVREALMHI ELSIIARDAF DPAQSNRRFR
110 120 130 140 150
IGLCDFITIV FFRHVAERVA REAPAVSFEL VALADEHDEL LRRGELDFII
160 170 180 190 200
LPEPFMSSAH PRIALFEERL VCVGCGTNGE LRRRLTFDRY MTMGHVAVKL
210 220 230 240 250
GVARMPPIEE SFLLDRGLNR RIDILVHSYG MIPPMLMGTS RIGTMPLRLV
260 270 280 290 300
KHFETTMPLR IAELPRPFPT FTEAVQWPVL QNSDPESIWM REILLQEAAR
310 320 330
MTSTSDDCSM SYASEQADTE GRLTSVASRL S
Length:331
Mass (Da):37,362
Last modified:April 12, 2017 - v1
Checksum:i6DC8311634DF5BCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
MOXO01000099 Genomic DNA Translation: OIM92942.1
RefSeqiWP_016848463.1, NZ_MOXO01000099.1

Genome annotation databases

GeneIDi23087653

Similar proteinsi

Entry informationi

Entry nameiA0A1S2SJ55_BRAEL
AccessioniPrimary (citable) accession number: A0A1S2SJ55
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: January 31, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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