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Protein
Submitted name:

Pectin lyase-like superfamily protein

Gene

QRT1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAspartyl esteraseSAAS annotation, Hydrolase, LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Pectin lyase-like superfamily proteinImported
Gene namesi
Name:QRT1Imported
Synonyms:MDF20.3Imported, MDF20_3Imported, QUARTET 1Imported
Ordered Locus Names:At5g55590Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_501111348427 – 332Sequence analysisAdd BLAST306

Expressioni

Gene expression databases

ExpressionAtlasiA0A1P8BEF8. baseline and differential.

Structurei

3D structure databases

SMRiA0A1P8BEF8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini82 – 327PectinesteraseInterPro annotationAdd BLAST246

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.160.20.10. 1 hit.
InterProiView protein in InterPro
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR000070. Pectinesterase_cat.
PfamiView protein in Pfam
PF01095. Pectinesterase. 1 hit.
SUPFAMiSSF51126. SSF51126. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1P8BEF8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVEAFIPAV LLLCFGVMLC LKSSCALQIG NNNELKNYIS WEDLRVVEDG
60 70 80 90 100
RIERSFSIKE NSNWVTTNAN ANANATNVRR VIVVDKNGGG DSVTVQGAVD
110 120 130 140 150
MVPDSNSQRV KIFILPGIYR EKVIVPKSKP YISFIGNESY AGDTVISWSD
160 170 180 190 200
KASDLGCDGK ELGTYRTASV SIESDFFCAT AITFENTVVA EAGEQGRQAV
210 220 230 240 250
ALRIIGDKAV FYRVRVLGSQ DTLFDDNGSH YFYQCYIQGN VDFIFGNAKS
260 270 280 290 300
LYQDCDIHST AKRYGAIAAH HRDSETEDTG FSFVNCDISG TGQIYLGRAW
310 320 330
GNYSRTVYSN CFIADIITPV GWSDWKHPER QR
Length:332
Mass (Da):36,816
Last modified:April 12, 2017 - v1
Checksum:i8F02187CA5C8430D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA. Translation: ANM69988.1.
RefSeqiNP_001331632.1. NM_001345146.1.
UniGeneiAt.29433.
At.6552.

Genome annotation databases

EnsemblPlantsiAT5G55590.2; AT5G55590.2; AT5G55590.
GeneIDi835653.
GrameneiAT5G55590.2; AT5G55590.2; AT5G55590.

Similar proteinsi

Entry informationi

Entry nameiA0A1P8BEF8_ARATH
AccessioniPrimary (citable) accession number: A0A1P8BEF8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: November 22, 2017
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported