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Protein
Submitted name:

Putative WRKY transcription factor 28

Gene

LC_TR903_c0_g1_i1_g.2354

Organism
Noccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative WRKY transcription factor 28Imported
Gene namesi
ORF Names:LC_TR903_c0_g1_i1_g.2354Imported, LE_TR15949_c0_g1_i1_g.50751Imported, MP_TR1983_c0_g1_i1_g.6141Imported
OrganismiNoccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens)Imported
Taxonomic identifieri107243 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeColuteocarpeaeNoccaea

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini159 – 224WRKYInterPro annotationAdd BLAST66

Family and domain databases

Gene3Di2.20.25.80, 1 hit
InterProiView protein in InterPro
IPR017396 TF_WRKY_IIc
IPR003657 WRKY_dom
IPR036576 WRKY_dom_sf
PfamiView protein in Pfam
PF03106 WRKY, 1 hit
PIRSFiPIRSF038130 TF_WRKY_IIc, 1 hit
SMARTiView protein in SMART
SM00774 WRKY, 1 hit
SUPFAMiSSF118290 SSF118290, 1 hit
PROSITEiView protein in PROSITE
PS50811 WRKY, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1J3I4L4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNDTKDLYN YQYPSSFSLY EMMNLPTSTP SSYGNISSQN VYDPSSYSFT
60 70 80 90 100
DCLQSSPGTY ESILQKKFGL SPSSSEVFNS SIDQESNRNV PSETPARVSA
110 120 130 140 150
SSSSSEADHP GEDSGKSQRK RELVGDGGED DQSSKKVGKT KKKEEKKQRE
160 170 180 190 200
PRVSFMTKSE VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TTQRCNVKKR
210 220 230 240 250
VERSFQDPTV VITTYEGQHN HPIPTNLRGS SAAAAMYPAD FMTPRNFTHD
260 270 280 290 300
MFRTSAYTSG GAAAAALDYG YGQIGYGSVD ANPSSHQEYR QGGEYELLKE
310
IFPSIFFKQE P
Length:311
Mass (Da):34,864
Last modified:February 15, 2017 - v1
Checksum:i377B216C9A7680F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GEVK01023292 Transcribed RNA Translation: JAU29540.1
GEVL01002175 Transcribed RNA Translation: JAU75166.1
GEVM01025530 Transcribed RNA Translation: JAU80408.1

Similar proteinsi

Entry informationi

Entry nameiA0A1J3I4L4_NOCCA
AccessioniPrimary (citable) accession number: A0A1J3I4L4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2017
Last sequence update: February 15, 2017
Last modified: January 31, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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