Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Pumilio domain-containing protein C6G9.14

Gene

A0J61_06145

Organism
Choanephora cucurbitarum
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri154 – 181C3H1-typePROSITE-ProRule annotationAdd BLAST28

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Pumilio domain-containing protein C6G9.14Imported
Gene namesi
ORF Names:A0J61_06145Imported
OrganismiChoanephora cucurbitarumImported
Taxonomic identifieri101091 [NCBI]
Taxonomic lineageiEukaryotaFungiMucoromycotaMucoromycotinaMucoralesMucorineaeChoanephoraceaeChoanephoroideaeChoanephora
Proteomesi
  • UP000093000 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini154 – 181C3H1-typeInterPro annotationAdd BLAST28
Domaini205 – 540PUM-HDInterPro annotationAdd BLAST336
Repeati226 – 249PumilioPROSITE-ProRule annotationAdd BLAST24
Repeati261 – 296PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati297 – 333PumilioPROSITE-ProRule annotationAdd BLAST37
Repeati334 – 356PumilioPROSITE-ProRule annotationAdd BLAST23
Repeati368 – 404PumilioPROSITE-ProRule annotationAdd BLAST37
Repeati405 – 440PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati441 – 476PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati477 – 514PumilioPROSITE-ProRule annotationAdd BLAST38

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri154 – 181C3H1-typePROSITE-ProRule annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotation

Family and domain databases

CDDicd07920. Pumilio. 1 hit.
Gene3Di1.25.10.10. 1 hit.
InterProiView protein in InterPro
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR033133. PUM-HD.
IPR033712. Pumilio_RNA-bd.
IPR001313. Pumilio_RNA-bd_rpt.
IPR000571. Znf_CCCH.
PfamiView protein in Pfam
PF00806. PUF. 5 hits.
SMARTiView protein in SMART
SM00025. Pumilio. 8 hits.
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiView protein in PROSITE
PS50302. PUM. 8 hits.
PS50303. PUM_HD. 1 hit.
PS50103. ZF_C3H1. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1C7N9K0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDKQETIRH SLFDDPVDLF HFSQIRPPSS RSMPASRRNS SDDPTLDVLL
60 70 80 90 100
GAKLSLNETE SSQRRLPFVM TTQDSTEPEV PMLNPLLSHS SEYLTPKGTH
110 120 130 140 150
RISSTASTTS DDYPELFHLD AMTHSSHKQE QRNAPIMTLP YWTKRVPYWP
160 170 180 190 200
TQRQTTDMPC PQFQQFGFCS RYDCLFQHPP PYPSLMSTYR SPSLYQQCMT
210 220 230 240 250
SPATSQPVFT KSKRQQDRFA NAQLDQFVGK LYDLCKDQNG CRFLQRQIEQ
260 270 280 290 300
DKGQLDLVFD EIHGHFIELM TDPFGNYLCQ KIIECSDDEQ RHTIVKTVAP
310 320 330 340 350
DLVHITLNVH GTRAAQKLIE CLSTPEQIHT VVAALRPHVV TLIKDLNGNH
360 370 380 390 400
VIQKCLSCLS SHNQFIYDVV CQHCIEVASH KHGCCVLQRC FDHATALQKD
410 420 430 440 450
QLVHEIAQHA LTLVQNAFGN YVVQYVLELG VPEYSESIIQ PFIGQVCLLS
460 470 480 490 500
IQKFSSNVIE NCIRTAQPKT RRLLIAELLD PIVTQRLLHD SFANYVIQTS
510 520 530 540
LDFADPDQRA ELVECIRPLL PTIRSTPYGK RIYNKIAKDA KSTSTH
Length:546
Mass (Da):62,298
Last modified:November 30, 2016 - v1
Checksum:i9494F5C7D8E0FFFF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LUGH01000357 Genomic DNA. Translation: OBZ85802.1.

Genome annotation databases

EnsemblFungiiOBZ85802; OBZ85802; A0J61_06145.

Entry informationi

Entry nameiA0A1C7N9K0_9FUNG
AccessioniPrimary (citable) accession number: A0A1C7N9K0
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2016
Last sequence update: November 30, 2016
Last modified: August 30, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported