Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA ligase-1

Gene

VAR608DRAFT_5633

Organism
Variovorax sp. HW608
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase-1Imported
Gene namesi
ORF Names:VAR608DRAFT_5633Imported
OrganismiVariovorax sp. HW608Imported
Taxonomic identifieri1034889 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
Proteomesi
  • UP000198203 Componenti: Chromosome i

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500874388128 – 291Sequence analysisAdd BLAST264

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini138 – 235DNA_LIGASE_A3InterPro annotationAdd BLAST98

Keywords - Domaini

SignalSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR006311. TAT_signal.
PfamiView protein in Pfam
PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS50160. DNA_LIGASE_A3. 1 hit.
PS51318. TAT. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1C6QHQ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVARRSFLL AAACAAFGLA HAPQAAAQSA SKPAPALMLA EVYRPGMPLA
60 70 80 90 100
DYWVSEKYDG IRGYWDGRQL WTRSGERIAV PRWFTEALPV EPLDGELWAG
110 120 130 140 150
RGRFSQTVST VRSQPPSDAA WREIRFMVFD VPAQPGDFTT RLAYLRKLLP
160 170 180 190 200
ITSVPWIVAV PQQRATTAED LDALLEKTMK MGGEGLMLHR GASLYRAGRS
210 220 230 240 250
GDLLKVKAYD EAEARVVGHV GGRGKHGGRL GALLVEMPGG KRFKLGTGLT
260 270 280 290
DAERENPPAT GTWVTYRYDG LTPSGLPRFA RFLRMREDAD F
Length:291
Mass (Da):32,036
Last modified:November 2, 2016 - v1
Checksum:iD681ACC63C3C3B95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LT607803 Genomic DNA. Translation: SCK54897.1.

Similar proteinsi

Entry informationi

Entry nameiA0A1C6QHQ7_9BURK
AccessioniPrimary (citable) accession number: A0A1C6QHQ7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 2, 2016
Last sequence update: November 2, 2016
Last modified: December 20, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported