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Protein
Submitted name:

Lamin B2

Gene

LMNB2

Organism
Nothobranchius furzeri (Turquoise killifish)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Lamin B2Imported
Gene namesi
Name:LMNB2Imported
OrganismiNothobranchius furzeri (Turquoise killifish)Imported
Taxonomic identifieri105023 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesNothobranchiidaeNothobranchius

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini443 – 552LTDInterPro annotationAdd BLAST110

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili35 – 69Sequence analysisAdd BLAST35
Coiled coili78 – 119Sequence analysisAdd BLAST42
Coiled coili141 – 175Sequence analysisAdd BLAST35
Coiled coili306 – 365Sequence analysisAdd BLAST60

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Family and domain databases

Gene3Di2.60.40.1260. 1 hit.
InterProiView protein in InterPro
IPR001664. IF.
IPR018039. Intermediate_filament_CS.
IPR001322. Lamin_tail_dom.
IPR036415. Lamin_tail_dom_sf.
PANTHERiPTHR23239. PTHR23239. 1 hit.
PfamiView protein in Pfam
PF00038. Filament. 1 hit.
PF00932. LTD. 1 hit.
SMARTiView protein in SMART
SM01391. Filament. 1 hit.
SUPFAMiSSF74853. SSF74853. 1 hit.
PROSITEiView protein in PROSITE
PS00226. IF. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1A8AYW3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATANVTPSR EAGRPAASTP LSPTRISRLQ EKQDLQHLND RLAVYIDRVR
60 70 80 90 100
ALELENDRLM VKVSEKEEVT TREVTGLKAL YEAELADARR VLDETAKERA
110 120 130 140 150
RLQIALGKAQ SELEEATRSA KKKDTDLAAA LSRAIGLEGQ LNKSEAALST
160 170 180 190 200
AQSQNAALTS ELADLKSQLA KAEDGHGVAK RQLEAETLMR VDLENRCQSL
210 220 230 240 250
SEELEFRKTM FEEEMRESQH RKEQRIVEVD SGIRSDYEFK LAQALQDLRK
260 270 280 290 300
QHDEQVSVYK EELEQTFQAK LDNAKVSSEM NDKAVGAARE EVQESRMRIE
310 320 330 340 350
SLGFQLSALQ KQLASSEDRI RELEETLSAE RDAHRRSVEG KELEMAELRD
360 370 380 390 400
RMNAQLSEYQ ELLDVKLALD MEINAYRKLL EGEEHRLKLS PSPSSRVTVS
410 420 430 440 450
RTTGSSSSRT SKRKRAEAEV QAQAQEVSQM GRGEEQLMVS EESTASGAIT
460 470 480 490 500
ISPTDMDGNA VTLNNDSEQD QPLGSWRIKR QVDDEDEIIY KFSPKYVLKS
510 520 530 540 550
GRSVTVWSAD AGVTHSPPSD LLWKSQASWG TGSVIITSVT NADGEEVARR
560 570 580
SVTRTQVEIE NGEEDEEEVV QRGKVSSREC SIM
Length:583
Mass (Da):65,287
Last modified:October 5, 2016 - v1
Checksum:i1D4B0335191C9F0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HADY01021724 Transcribed RNA. Translation: SBP60209.1.
HAEJ01003193 Transcribed RNA. Translation: SBS43650.1.
RefSeqiXP_015817715.1. XM_015962229.1.

Genome annotation databases

GeneIDi107387322.

Similar proteinsi

Entry informationi

Entry nameiA0A1A8AYW3_NOTFU
AccessioniPrimary (citable) accession number: A0A1A8AYW3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2016
Last sequence update: October 5, 2016
Last modified: October 25, 2017
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)