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Protein
Submitted name:

Sorting nexin 1b

Gene

SNX1B

Organism
Nothobranchius furzeri (Turquoise killifish)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sorting nexin 1bImported
Gene namesi
Name:SNX1BImported
OrganismiNothobranchius furzeri (Turquoise killifish)Imported
Taxonomic identifieri105023 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesNothobranchiidaeNothobranchius

Subcellular locationi

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini136 – 265PXInterPro annotationAdd BLAST130

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili356 – 376Sequence analysisAdd BLAST21
Coiled coili439 – 459Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

KOiK17917

Family and domain databases

Gene3Di1.20.1270.60, 1 hit
3.30.1520.10, 1 hit
InterProiView protein in InterPro
IPR027267 AH/BAR_dom_sf
IPR001683 Phox
IPR036871 PX_dom_sf
IPR005329 Sorting_nexin_N
IPR015404 Vps5_C
PfamiView protein in Pfam
PF00787 PX, 1 hit
PF03700 Sorting_nexin, 1 hit
PF09325 Vps5, 1 hit
SMARTiView protein in SMART
SM00312 PX, 1 hit
SUPFAMiSSF103657 SSF103657, 1 hit
SSF64268 SSF64268, 1 hit
PROSITEiView protein in PROSITE
PS50195 PX, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1A8A008-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSASLNRKPP LFPETEEPEP DMADEDSDEG EDIFVSNSKP ESVSRGVSQP
60 70 80 90 100
ERVPEEPEDL FSEERCRSTK ANGVHPDDDT DLFAEARTDF NSDKSSSSAQ
110 120 130 140 150
KELSDTPSTS SFSRTPAALH STSLEQLEEE EAKSSFDVDV AVTNPEKVGD
160 170 180 190 200
GMNAYMAYKV STRSSLSMFK SKAFTVRRRF SDFLGLYEKL SVKQSLHGCI
210 220 230 240 250
IPPPPEKSVV GMTKMKVGMD DPSSVEFLER RRAALERFLQ RVVSHPLLLQ
260 270 280 290 300
DPDVREFLER DDLPRAVNTQ TLSGAGFLKM ITKASDAVSK MTIKMNESDT
310 320 330 340 350
WFEDKFQEVE AEEQQLRKLH VVVDSLVNHR KELCVNTAIF AKSMAMLGNS
360 370 380 390 400
EDSTALSRAL SQLAEVEDKM EQLHQEQAAS DFFIFAELLA DYIRLLAAVR
410 420 430 440 450
GCFDQRVRSW QRWQEAQSTL QKKREAEAKL LWANKPDKLQ QAKEEITEWE
460 470 480 490 500
ARVTQYERDF DRVGMAVRKE VLRFEKEKTK DFKSQIVKYL EAMLQSQQRL
510
IKFWEAFLPE AKAIA
Length:515
Mass (Da):58,661
Last modified:October 5, 2016 - v1
Checksum:i5FA5C756C9BF5047
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HADY01009992 Transcribed RNA Translation: SBP48477.1
HAEJ01011504 Transcribed RNA Translation: SBS51961.1
RefSeqiXP_015809132.1, XM_015953646.1

Genome annotation databases

GeneIDi107381774
KEGGinfu:107381774

Similar proteinsi

Entry informationi

Entry nameiA0A1A8A008_NOTFU
AccessioniPrimary (citable) accession number: A0A1A8A008
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2016
Last sequence update: October 5, 2016
Last modified: February 28, 2018
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health