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Protein
Submitted name:

Uncharacterized protein

Gene

A6R68_14551

Organism
Neotoma lepida (Desert woodrat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:A6R68_14551Imported
OrganismiNeotoma lepida (Desert woodrat)Imported
Taxonomic identifieri56216 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeNeotominaeNeotoma
Proteomesi
  • UP000092124 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini214 – 246RanBP2-typeInterPro annotationAdd BLAST33
Domaini306 – 348RING-typeInterPro annotationAdd BLAST43

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili257 – 284Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR002867 IBR_dom
IPR026261 RBCK1
IPR027370 Znf-RING_LisH
IPR001876 Znf_RanBP2
IPR036443 Znf_RanBP2_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR22770:SF35 PTHR22770:SF35, 1 hit
PfamiView protein in Pfam
PF01485 IBR, 1 hit
PF13445 zf-RING_UBOX, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
SM00547 ZnF_RBZ, 1 hit
SUPFAMiSSF90209 SSF90209, 1 hit
PROSITEiView protein in PROSITE
PS01358 ZF_RANBP2_1, 1 hit
PS50199 ZF_RANBP2_2, 1 hit
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1A6H9E5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDEKTKKGGH RLELVAMGPG LGLWWGRRLS EHRTSNLENF WLLGKQTSVD
60 70 80 90 100
QTEEMALSLA RAVAGGDEQA AMKYATWLAE QRVPLRVQVK PEVSSTQDIR
110 120 130 140 150
LCVSVEDAYM HTVTIWLTVR PDMTVASLKD MRLARDQETL HSHGVRRNGD
160 170 180 190 200
SAYLYLLSAC NTSLNPQELQ RQRQLRMLED LGFKDLTLQP RGPLEPVLPK
210 220 230 240 250
PRAHQEPGQP DAAPESPPVG WQCPGCTFIN KPTRPGCEMC CRARPETYQI
260 270 280 290 300
PASYQPDEEE RARLAGEEEA LRQYQQRKQQ QQEGNYLQHV QLEQRSLVLN
310 320 330 340 350
TEPAECPVCY SVLAPGEAVV LRECLHTFCR ECLQGTIRNS QEAEVSCPFI
360 370 380 390 400
DSTYSCPGKL LEREIRALLS PEDYQRFLDL GVSIAENRST LSYHCKTPDC
410 420 430 440 450
RGWCFFEDDV NEFTCPVCSH VNCLLCKAIH ERMNCREYQD DLALRAQNDV
460 470 480 490 500
AARQTTEMLR VMLQQGEAMH CPQCRIVVQK KDGCDWIRCT VCHTEICWVT
510 520 530
KGPRWGPGGP GDTSGGCRCR VNGIPCHPSC QNCH
Length:534
Mass (Da):60,462
Last modified:October 5, 2016 - v1
Checksum:i108351E13FE5A8A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LZPO01044386 Genomic DNA Translation: OBS74916.1

Similar proteinsi

Entry informationi

Entry nameiA0A1A6H9E5_NEOLE
AccessioniPrimary (citable) accession number: A0A1A6H9E5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2016
Last sequence update: October 5, 2016
Last modified: May 23, 2018
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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