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Protein

Integration host factor subunit beta

Gene

ihfB

Organism
Pseudomonas putida (Arthrobacter siderocapsulatus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotationSAAS annotation
Biological processDNA recombinationUniRule annotationSAAS annotation, Transcription, Transcription regulationUniRule annotationSAAS annotation, Translation regulationUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Integration host factor subunit betaUniRule annotationSAAS annotation
Short name:
IHF-betaUniRule annotation
Gene namesi
Name:ihfBUniRule annotation
Synonyms:himDUniRule annotation
ORF Names:AYO08_02005Imported
OrganismiPseudomonas putida (Arthrobacter siderocapsulatus)Imported
Taxonomic identifieri303 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000078222 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Heterodimer of an alpha and a beta chain.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliA0A179R9A3.
SMRiA0A179R9A3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial histone-like protein family.UniRule annotationSAAS annotation

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
HAMAPiMF_00381. IHF_beta. 1 hit.
InterProiView protein in InterPro
IPR000119. Hist_DNA-bd.
IPR020816. Histone-like_DNA-bd_CS.
IPR010992. IHF-like_DNA-bd_dom_sf.
IPR005685. IHF_beta.
PANTHERiPTHR33175. PTHR33175. 1 hit.
PfamiView protein in Pfam
PF00216. Bac_DNA_binding. 1 hit.
PRINTSiPR01727. DNABINDINGHU.
SMARTiView protein in SMART
SM00411. BHL. 1 hit.
SUPFAMiSSF47729. SSF47729. 1 hit.
TIGRFAMsiTIGR00988. hip. 1 hit.
PROSITEiView protein in PROSITE
PS00045. HISTONE_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A179R9A3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKSELIERI VTHQGLLSSK DVELAIKTML EQMSQCLATG DRIEIRGFGS
60 70 80 90 100
FSLHYRAPRV GRNPKTGQSV SLEGKFVPHF KPGKELRDRV NEDEHEEAHT
Length:100
Mass (Da):11,332
Last modified:September 7, 2016 - v1
Checksum:i57824A881BF69E8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LSUZ01000192 Genomic DNA. Translation: OAS05052.1.
RefSeqiWP_010952810.1. NZ_LT799039.1.

Genome annotation databases

EnsemblBacteriaiOAS05052; OAS05052; AYO08_02005.
PATRICifig|303.175.peg.5668.

Similar proteinsi

Entry informationi

Entry nameiA0A179R9A3_PSEPU
AccessioniPrimary (citable) accession number: A0A179R9A3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 7, 2016
Last sequence update: September 7, 2016
Last modified: March 28, 2018
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported