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Protein

Peptide chain release factor 1

Gene

prfA

Organism
Sinorhizobium saheli
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.UniRule annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Keywordsi

Biological processProtein biosynthesisUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Peptide chain release factor 1UniRule annotation
Short name:
RF-1UniRule annotation
Gene namesi
Name:prfAUniRule annotation
ORF Names:ATB98_11770Imported
OrganismiSinorhizobium saheliImported
Taxonomic identifieri36856 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000078507 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotation

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei235N5-methylglutamineUniRule annotation1

Post-translational modificationi

Methylated by PrmC. Methylation increases the termination efficiency of RF1.UniRule annotation

Keywords - PTMi

MethylationUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini228 – 244RF_PROK_IInterPro annotationAdd BLAST17

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili76 – 96Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the prokaryotic/mitochondrial release factor family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

HAMAPiMF_00093 Rel_fac_1, 1 hit
InterProiView protein in InterPro
IPR005139 PCRF
IPR000352 Pep_chain_release_fac_I_II
IPR004373 PrfA
PfamiView protein in Pfam
PF03462 PCRF, 1 hit
PF00472 RF-1, 1 hit
SMARTiView protein in SMART
SM00937 PCRF, 1 hit
TIGRFAMsiTIGR00019 prfA, 1 hit
PROSITEiView protein in PROSITE
PS00745 RF_PROK_I, 1 hit

Sequencei

Sequence statusi: Complete.

A0A178Y7N9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKLPVEKMR ELERRFGEIE ARMSAGPSAD VYVKLASEYS ELQPVVTKIR
60 70 80 90 100
AYQQAERERA DIDAMLADRT TDREMRDLAE MERPEVEERI EALEQEIQIL
110 120 130 140 150
LLPKDAADEK SAILEIRAGT GGSEAALFAG DLFRMYERYA AGKGWRVEVL
160 170 180 190 200
SASEGEAGGY KEIIATVSGR GVFSRLKFES GVHRVQRVPE TEASGRIHTS
210 220 230 240 250
AATVAVLPEA EEIDIDIRPE DIRIDTMRSS GAGGQHVNTT DSAVRITHIP
260 270 280 290 300
TGIVVTSSEK SQHQNRAKAM QVLRSRLYDM ERQRADNERS ADRRSQVGSG
310 320 330 340 350
DRSERIRTYN FPQGRITDHR INLTLYKLDR MMEGEIDEVV DALLADYQAS
360
QLALLGETQN
Length:360
Mass (Da):40,355
Last modified:September 7, 2016 - v1
Checksum:i5D31A28ED20328C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LNQB01000078 Genomic DNA Translation: OAP43374.1
RefSeqiWP_066875948.1, NZ_LNQB01000078.1

Genome annotation databases

EnsemblBacteriaiOAP43374; OAP43374; ATB98_11770

Similar proteinsi

Entry informationi

Entry nameiA0A178Y7N9_SINSA
AccessioniPrimary (citable) accession number: A0A178Y7N9
Entry historyiIntegrated into UniProtKB/TrEMBL: September 7, 2016
Last sequence update: September 7, 2016
Last modified: December 20, 2017
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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