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Protein

Coatomer subunit delta

Gene

RET2

Organism
Sugiyamaella lignohabitans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.UniRule annotation

GO - Biological processi

Keywordsi

Biological processER-Golgi transportUniRule annotation, Protein transportUniRule annotationSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Coatomer subunit deltaUniRule annotation
Gene namesi
Name:RET2Imported
ORF Names:AWJ20_841Imported
OrganismiSugiyamaella lignohabitansImported
Taxonomic identifieri796027 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesTrichomonascaceaeSugiyamaella
Proteomesi
  • UP000189580 Componenti: Chromosome a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

CytoplasmUniRule annotation, Cytoplasmic vesicleUniRule annotation, Golgi apparatusUniRule annotation, MembraneUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini169 – 418MHDInterPro annotationAdd BLAST250

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1 – 41Sequence analysisAdd BLAST41

Sequence similaritiesi

Belongs to the adaptor complexes medium subunit family. Delta-COP subfamily.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR036168. AP2_Mu_C_sf.
IPR027059. Coatomer_dsu.
IPR028565. MHD.
PANTHERiPTHR10121. PTHR10121. 1 hit.
PfamiView protein in Pfam
PF00928. Adap_comp_sub. 1 hit.
SUPFAMiSSF49447. SSF49447. 1 hit.
PROSITEiView protein in PROSITE
PS51072. MHD. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A167D7S2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MESHEEKIQE IIERNKELEA AEERKKKAKQ LEMQRREVSK RGGVGGIGNS
60 70 80 90 100
ASVGAGYGGN IGSGFGNSSL ASNSYASNNG SNSSIYNNSD YDSGASKKPL
110 120 130 140 150
SAFKGRGLQL GSKKGSSSFH SEASPLMGEE EDPLEYKEKA PSSLTTADHS
160 170 180 190 200
ARSRTTLASA HQHKSSSDNQ GIEVSIVETI SATLGRDGSV VNSEIKGHLD
210 220 230 240 250
LRIADPNLAK VKLLTSANGQ DVGSQYKTHP NVDKAKFSQQ NIITVRDPSR
260 270 280 290 300
PFPSNNQELS VLRWKVNGKP DDNHLAPVTF NCWFSRSDPG FFDVTIEYEL
310 320 330 340 350
NPLFSETLDN LVVTIPLVSS NAHVSDASLV WDQFDDHLEW IVPVIQPGSD
360 370 380 390 400
NTSGSFEFTA EADSEEDFFP MNVSFKVKDS LTTFGKVDVR DVVSASDESI
410
SVPFQKRTDV SSDTYIIS
Length:418
Mass (Da):45,481
Last modified:July 6, 2016 - v1
Checksum:i093128D4FAA80AE6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP014501 Genomic DNA. Translation: ANB12584.1.
RefSeqiXP_018735061.1. XM_018882810.1.

Genome annotation databases

EnsemblFungiiANB12584; ANB12584; AWJ20_841.
GeneIDi30037918.

Entry informationi

Entry nameiA0A167D7S2_9ASCO
AccessioniPrimary (citable) accession number: A0A167D7S2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 6, 2016
Last sequence update: July 6, 2016
Last modified: December 20, 2017
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported