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Protein

tRNA pseudouridine synthase B

Gene

truB

Organism
Paracoccus sp. MKU1
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.UniRule annotationSAAS annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei46NucleophileUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotation
Biological processtRNA processingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase BUniRule annotation (EC:5.4.99.25UniRule annotation)
Alternative name(s):
tRNA pseudouridine(55) synthaseUniRule annotation
Short name:
Psi55 synthaseUniRule annotation
tRNA pseudouridylate synthaseUniRule annotation
tRNA-uridine isomeraseUniRule annotation
Gene namesi
Name:truBUniRule annotation
ORF Names:AQY21_13255Imported
OrganismiParacoccus sp. MKU1Imported
Taxonomic identifieri1745182 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus
Proteomesi
  • UP000054373 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 178TruB_NInterPro annotationAdd BLAST148
Domaini179 – 236TruB_C_2InterPro annotationAdd BLAST58

Sequence similaritiesi

Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.UniRule annotationSAAS annotation

Family and domain databases

HAMAPiMF_01080 TruB_bact, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR002501 PsdUridine_synth_N
IPR014780 tRNA_psdUridine_synth_TruB
IPR032819 TruB_C
PANTHERiPTHR13767 PTHR13767, 1 hit
PfamiView protein in Pfam
PF16198 TruB_C_2, 1 hit
PF01509 TruB_N, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00431 TruB, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0V0Q0U7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARKKGREIH GWLIVDKPAG IGSTDVVSKV RWALDAKKAG HAGTLDPDAT
60 70 80 90 100
GVLAVALGEA TKTVPILAEA LKAYDFTVTW GAETTTDDAS GAAVKTSDAR
110 120 130 140 150
PDEAAIRTAL PEFTGEIMQV PPAVSAVRVD GARAYDLARE GEVVELAARP
160 170 180 190 200
LWVDSLELLG AAQDSAELRM VCGKGGYVRA IARDLGRKLG CLGHVAQLRR
210 220 230 240 250
IWSGPFDAAD GFAFDRIDRA NQAEIEAALL PLQAALADLP EMQATEIGAT
260 270 280 290
RILNGNPGQV LGHAEFGEEV WVSRNGRALC IGRYMGGEVQ PSRVFNLG
Length:298
Mass (Da):31,564
Last modified:March 16, 2016 - v1
Checksum:i309BE29102EB99CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LLWQ01000168 Genomic DNA Translation: KRW95671.1
RefSeqiWP_058098115.1, NZ_LLWQ01000168.1

Genome annotation databases

EnsemblBacteriaiKRW95671; KRW95671; AQY21_13255

Similar proteinsi

Entry informationi

Entry nameiA0A0V0Q0U7_9RHOB
AccessioniPrimary (citable) accession number: A0A0V0Q0U7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 16, 2016
Last sequence update: March 16, 2016
Last modified: May 23, 2018
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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