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Protein
Submitted name:

Quorum-sensing transcriptional activator

Gene

yenR

Organism
Yersinia enterocolitica
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi198 – 217H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Quorum-sensing transcriptional activatorImported
Gene namesi
Name:yenRImported
ORF Names:ERS137951_02004Imported
OrganismiYersinia enterocoliticaImported
Taxonomic identifieri630 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000039517 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5L07X-ray2.20A/B1-179[»]
SMRiA0A0T9SEJ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini174 – 239HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

KOiK19734.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR005143. TF_LuxR_autoind-bd_dom.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF03472. Autoind_bind. 1 hit.
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF75516. SSF75516. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0T9SEJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIIDYFDNES INEDIKNYIQ RRIKAYGDLR YSYLVMNKKT PLHPTIISNY
60 70 80 90 100
PLDWVKKYKK NSYHLIDPVI LTAKDKVAPF AWDDNSVINK KSTDSAVFKL
110 120 130 140 150
AREYNIVNGY TFVLHDNSNN MATLNISNGS DDSISFDESI EINKEKIQML
160 170 180 190 200
LILTHEKMLG LYQSNSDKNE NRNPKIERDI FSPRENEILY WASVGKTYAE
210 220 230 240
ISIILGIKRS TVKFHIGNVV RKLGVLNAKH AIRLGIELKL IKPI
Length:244
Mass (Da):28,198
Last modified:February 17, 2016 - v1
Checksum:i9C44DD232FC8CBA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CQCV01000010 Genomic DNA. Translation: CNJ78454.1.
RefSeqiWP_005170826.1. NZ_NBTE01000002.1.

Genome annotation databases

EnsemblBacteriaiCNJ78454; CNJ78454; ERS137951_02004.
KEGGiyew:CH47_1046.
PATRICifig|630.32.peg.1135.

Similar proteinsi

Entry informationi

Entry nameiA0A0T9SEJ2_YEREN
AccessioniPrimary (citable) accession number: A0A0T9SEJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 17, 2016
Last sequence update: February 17, 2016
Last modified: September 27, 2017
This is version 16 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported