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Protein

Flagellar brake protein YcgR

Gene

ycgR

Organism
Janthinobacterium sp. CG23_2
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Ligandc-di-GMPUniRule annotation, Nucleotide-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar brake protein YcgRUniRule annotation
Alternative name(s):
Cyclic di-GMP binding protein YcgRUniRule annotation
Gene namesi
Name:ycgRUniRule annotation
ORF Names:BN2497_4751Imported, BN3177_4751Imported
OrganismiJanthinobacterium sp. CG23_2Imported
Taxonomic identifieri1706231 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeJanthinobacterium
Proteomesi
  • UP000052254 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Bacterial flagellum basal body UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Bacterial flagellumUniRule annotation

Interactioni

Subunit structurei

Monomer. Interacts with the flagellar basal bodies.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 121T3SS_YcgR_NInterPro annotationAdd BLAST107
Domaini123 – 237PilZInterPro annotationAdd BLAST115

Sequence similaritiesi

Belongs to the YcgR family.UniRule annotation

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
HAMAPiMF_01457. YcgR. 1 hit.
InterProiView protein in InterPro
IPR009875. PilZ_domain.
IPR012349. Split_barrel_FMN-bd.
IPR023787. T3SS_YcgR.
IPR009926. T3SS_YcgR_N.
PfamiView protein in Pfam
PF07238. PilZ. 1 hit.
PF07317. YcgR. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0S4K5N7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQSTNDSDIE SWHDFEVASR KEIIALLRGI GEKRQLVRMV IRRGTEVCVS
60 70 80 90 100
AILDVDPDNN TLTLDGSADP EQHRRFANVG RMAFETSLDK IRILFASEEV
110 120 130 140 150
HATTFEDTPA FTIPIPETLI RLQRREFYRM ATPVSNPVSV VIRLPQDAGG
160 170 180 190 200
GTHVFPLADI SCGGIAILDN KLVLGSTIGQ SYTGCRIDLP DVGAVQTTLM
210 220 230 240 250
IRNSVDLTLL NDKTNRRLGC AFVDISRGGL ASVQKYITKL ERERNARLAG

LG
Length:252
Mass (Da):27,795
Last modified:February 17, 2016 - v1
Checksum:iF8DFE17EF8096946
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CYSS01000001 Genomic DNA. Translation: CUI04987.1.
FAOS01000001 Genomic DNA. Translation: CUU28773.1.
RefSeqiWP_054264130.1. NZ_FAOS01000001.1.

Genome annotation databases

EnsemblBacteriaiCUU28773; CUU28773; BN3177_4751.

Similar proteinsi

Entry informationi

Entry nameiA0A0S4K5N7_9BURK
AccessioniPrimary (citable) accession number: A0A0S4K5N7
Entry historyiIntegrated into UniProtKB/TrEMBL: February 17, 2016
Last sequence update: February 17, 2016
Last modified: September 27, 2017
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported