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Protein

60S ribosomal protein L13

Gene

rpl13

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L13UniRule annotation
Gene namesi
Name:rpl13Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 7

Organism-specific databases

ZFINiZDB-GENE-031007-1. rpl13.

Subcellular locationi

Expressioni

Gene expression databases

ExpressionAtlasiA0A0R4IUM6. baseline.

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL13 family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000007818.

Family and domain databases

HAMAPiMF_00499. Ribosomal_L13e. 1 hit.
InterProiView protein in InterPro
IPR001380. Ribosomal_L13e.
IPR018256. Ribosomal_L13e_CS.
PANTHERiPTHR11722. PTHR11722. 1 hit.
PfamiView protein in Pfam
PF01294. Ribosomal_L13e. 1 hit.
PROSITEiView protein in PROSITE
PS01104. RIBOSOMAL_L13E. 1 hit.

Sequencei

Sequence statusi: Fragment.

A0A0R4IUM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPSRNGMIL NPHFHKDWQK RVRTWFNQPA RKIRRRKARQ AKARRIAPRP
60 70 80 90 100
VSGPLRPVVR CPTIRYHTKV RAGRGFTLEE LKAAGINKKV ARTIGISVDS
110 120 130 140 150
RRRNRSTESL QANVQRLKEY RTKLIIFPRK AAKPKKGDST EEELKMATQL

TGPVMPIK
Length:158
Mass (Da):18,255
Last modified:January 20, 2016 - v1
Checksum:iEE83C04206916371
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei158Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU651676 Genomic DNA. No translation available.
CU683900 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSDART00000170322; ENSDARP00000140661; ENSDARG00000099380.

Similar proteinsi

Entry informationi

Entry nameiA0A0R4IUM6_DANRE
AccessioniPrimary (citable) accession number: A0A0R4IUM6
Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: December 20, 2017
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported