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Protein
Submitted name:

General transcription factor IIA, 1

Gene

gtf2a1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-DRE-674695 RNA Polymerase II Pre-transcription Events
R-DRE-6807505 RNA polymerase II transcribes snRNA genes
R-DRE-73776 RNA Polymerase II Promoter Escape
R-DRE-73779 RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
R-DRE-75953 RNA Polymerase II Transcription Initiation
R-DRE-76042 RNA Polymerase II Transcription Initiation And Promoter Clearance
R-DRE-9018519 Estrogen-dependent gene expression

Names & Taxonomyi

Protein namesi
Submitted name:
General transcription factor IIA, 1Imported
Gene namesi
Name:gtf2a1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 20

Organism-specific databases

ZFINiZDB-GENE-030131-2694 gtf2a1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiA0A0R4IDL3 baseline

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00900000141061

Family and domain databases

CDDicd07976 TFIIA_alpha_beta_like, 2 hits
Gene3Di2.30.18.10, 1 hit
InterProiView protein in InterPro
IPR004855 TFIIA_asu/bsu
IPR009088 TFIIA_b-brl
PfamiView protein in Pfam
PF03153 TFIIA, 3 hits
SMARTiView protein in SMART
SM01371 TFIIA, 1 hit
SUPFAMiSSF50784 SSF50784, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0R4IDL3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSANSNQV PKLYRSVMED VIAEVRELFL DEGVDEQVLM ELKTLWESKL
60 70 80 90 100
MQSKAVDGFH TEEQQVLHAQ QQQAQAQQTQ PQTQPQQVLL PPAQTTPQQQ
110 120 130 140 150
VIVQDAKIMQ HMSATGMSAA ATAATLALPT GVAPFQQLIT PQGQILQVVR
160 170 180 190 200
AANGAQYIIQ PQQQMLLQQQ VLPQMQPGGV QAPVIQQVLT PLQGGLPQQT
210 220 230 240 250
GVIIQPQQIV LTGNKVPQNT QVMQAAAMAV QSGPGDAQVQ TQPQAQQQQQ
260 270 280 290 300
QQQQQASQQP PMMLQVDGAG DTSSEEDEEE EDEYDEDEDE DKEKDGGEDG
310 320 330 340 350
QVEEEPLNSG DDVSDEEDQE LFDTENVVVC QYDKVFSFFH CHLLCLTQET
360 370 380 390
RKVYSHFKIH RSKNKWKFHL KDGIMNLNGR DFVFSKAIGD AEW
Length:393
Mass (Da):43,739
Last modified:January 20, 2016 - v1
Checksum:i0B28DFEF247C8960
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX890568 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSDART00000159053; ENSDARP00000132090; ENSDARG00000011000

Similar proteinsi

Entry informationi

Entry nameiA0A0R4IDL3_DANRE
AccessioniPrimary (citable) accession number: A0A0R4IDL3
Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: May 23, 2018
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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