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Protein

Beta-(1-->2)glucan export ATP-binding/permease protein NdvA

Gene

ndvA

Organism
Mesorhizobium sp. Root102
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.UniRule annotation

Catalytic activityi

ATP + H2O + beta-glucan(In) = ADP + phosphate + beta-glucan(Out).UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi368 – 375ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Molecular functionHydrolaseUniRule annotation
Biological processSugar transportUniRule annotation, Transport
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-(1-->2)glucan export ATP-binding/permease protein NdvAUniRule annotation (EC:3.6.3.42UniRule annotation)
Gene namesi
Name:ndvAUniRule annotation
ORF Names:ASD12_13145Imported
OrganismiMesorhizobium sp. Root102Imported
Taxonomic identifieri1736422 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
Proteomesi
  • UP000051147 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 42HelicalSequence analysisAdd BLAST22
Transmembranei54 – 77HelicalSequence analysisAdd BLAST24
Transmembranei160 – 177HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Keywords - Cellular componenti

Cell membraneUniRule annotation, Membrane

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 301ABC transmembrane type-1InterPro annotationAdd BLAST280
Domaini335 – 588NDVAInterPro annotationAdd BLAST254
Domaini335 – 569ABC transporterInterPro annotationAdd BLAST235

Domaini

In NdvA the ATP-binding domain (NBD) and the transmembrane domain (TMD) are fused.UniRule annotation

Sequence similaritiesi

Belongs to the ABC transporter superfamily. Beta-(1-->2)glucan exporter (TC 3.A.1.108.1) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Family and domain databases

Gene3Di1.20.1560.10. 1 hit.
InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR036640. ABC1_TM_sf.
IPR017902. ABC_bGlucan_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR005896. NdvA.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 2 hits.
TIGRFAMsiTIGR01192. chvA. 1 hit.
PROSITEiView protein in PROSITE
PS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS51317. NDVA. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0Q6MHB1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLLQIYWRA LGYLAADRKR VALICSANVA LAIVALLEPI MFGRVIGAIS
60 70 80 90 100
ERGSVFTTLV MWAGLGAFNI VAFVMVARGA DRFAHARRSE VLCQSFERVI
110 120 130 140 150
TMPLAWHHQH GTSNALHTML RAVETLFSLW LEFMRQHLST AVALVLLVPT
160 170 180 190 200
AISMDLRMSL VLLGLGLLYV GIGRMVMRRT KAGQAAVERH YHKVFAHVTD
210 220 230 240 250
SVSNVAVLQS YNRLGLEADT LRRYVKNLLD AQNPVLDWWA LANALHRLSS
260 270 280 290 300
AISMLIVLSI GSYLVTHGQL RIGDVIAFTG FATMLIARLD QMSAFANQIS
310 320 330 340 350
EARAKLEDFY QLEDSAADSA EPDGLRDLAN VTGHVRFENV GFEFANSGQG
360 370 380 390 400
IDDVSFEVQA GQTVAIVGPT GAGKTTLINL LQRVFSPSHG RILIDGVDTR
410 420 430 440 450
TVTRKSLRHS IATVFQDAGL LNRSIEDNIR VGRADATNDE IHAAADAAAA
460 470 480 490 500
RDFILSKSNG YDTVVGERGG QLSGGERQRI AIARAVLKDA PILVLDEATS
510 520 530 540 550
ALDVETEDRV KDAIDELRRD RTTFIIAHRL TTVRDADLVV FMDKGRVVEM
560 570 580 590
GGFAELSLRN GRFASLLRAG GLLNDEEVRR LSRTVQQQQE AAA
Length:593
Mass (Da):64,996
Last modified:January 20, 2016 - v1
Checksum:i6510E45F54409896
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LMCP01000045 Genomic DNA. Translation: KQU79577.1.

Genome annotation databases

EnsemblBacteriaiKQU79577; KQU79577; ASD12_13145.

Similar proteinsi

Entry informationi

Entry nameiA0A0Q6MHB1_9RHIZ
AccessioniPrimary (citable) accession number: A0A0Q6MHB1
Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: October 25, 2017
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported