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Protein

Tetraspanin

Gene

CD9

Organism
Heterocephalus glaber (Naked mole rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
TetraspaninUniRule annotation
Gene namesi
Name:CD9Imported
OrganismiHeterocephalus glaber (Naked mole rat)Imported
Taxonomic identifieri10181 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaHystricomorphaBathyergidaeHeterocephalus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 35HelicalUniRule annotationAdd BLAST24
Transmembranei55 – 81HelicalUniRule annotationAdd BLAST27
Transmembranei88 – 110HelicalUniRule annotationAdd BLAST23
Transmembranei194 – 220HelicalUniRule annotationAdd BLAST27

Keywords - Cellular componenti

Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the tetraspanin (TM4SF) family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

KOiK06460.

Family and domain databases

Gene3Di1.10.1450.10. 1 hit.
InterProiView protein in InterPro
IPR000301. Tetraspanin.
IPR018499. Tetraspanin/Peripherin.
IPR018503. Tetraspanin_CS.
IPR008952. Tetraspanin_EC2_sf.
PfamiView protein in Pfam
PF00335. Tetraspannin. 1 hit.
PIRSFiPIRSF002419. Tetraspanin. 1 hit.
PRINTSiPR00259. TMFOUR.
SUPFAMiSSF48652. SSF48652. 1 hit.
PROSITEiView protein in PROSITE
PS00421. TM4_1. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0P6JFD7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVKGGSKCI KYLLFGFNFI FWLAGIAVLA IGLWLRFDSQ TKSIFEQDSN
60 70 80 90 100
SNSSFYTGVY ILIGAGALMM VVGFLGCCGA VQESQCMLGL FFCFLLVIFG
110 120 130 140 150
IEVAAAAWGF THKDEVIKRV QDFYIDTYSK LKNKDEPQRE TLKAIHKALD
160 170 180 190 200
CCGVVGGIEQ FISDICPNNG IINNLKVKPC PEAIREVFDN KFHIIGAVGI
210 220
AIAVVMIFGM IFSMILCCAI RRDRGMV
Length:227
Mass (Da):25,085
Last modified:January 20, 2016 - v1
Checksum:iCB060D64DC62317B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GEBF01000390 Transcribed RNA. Translation: JAO03243.1.
RefSeqiXP_004869436.1. XM_004869379.1.

Genome annotation databases

EnsembliENSHGLT00000002190; ENSHGLP00000002142; ENSHGLG00000001625.
GeneIDi101698230.
KEGGihgl:101698230.

Similar proteinsi

Entry informationi

Entry nameiA0A0P6JFD7_HETGA
AccessioniPrimary (citable) accession number: A0A0P6JFD7
Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: November 22, 2017
This is version 12 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)