VT25_08475

Functionⁱ

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityⁱ

2 superoxide + 2 H⁺ = O₂ + H₂O₂.UniRule annotation

Cofactorⁱ

Protein has several cofactor binding sites:

Cu cation
UniRule annotation
Automatic assertion according to rulesⁱ
- RuleBase:RU000393
Note: Binds 1 copper ion per subunit.
UniRule annotation
Automatic assertion according to rulesⁱ
- RuleBase:RU000393
Zn²⁺
UniRule annotation
Automatic assertion according to rulesⁱ
- RuleBase:RU000393
Note: Binds 1 zinc ion per subunit.
UniRule annotation
Automatic assertion according to rulesⁱ
- RuleBase:RU000393

GO - Molecular functionⁱ

metal ion binding Source: UniProtKB-KW
superoxide dismutase activity Source: UniProtKB-EC

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	OxidoreductaseUniRule annotation
Ligand	CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesⁱ	ORF Names:VT25_08475Imported
Organismⁱ	Photobacterium leiognathi subsp. mandapamensis (Photobacterium mandapamensis)Imported
Taxonomic identifierⁱ	48408 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Photobacterium › Photobacterium leiognathi
Proteomesⁱ	UP000037881 Componentⁱ: Unassembled WGS sequence

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Signal peptideⁱ	1 – 22	Sequence analysisAdd BLAST		22
ChainⁱPRO_5005835576	23 – 173	Superoxide dismutase [Cu-Zn]Sequence analysisAdd BLAST		151

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	35 – 172	Sod_CuInterPro annotationAdd BLAST		138

Sequence similaritiesⁱ

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domainⁱ

SignalSequence analysis

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd00305. Cu-Zn_Superoxide_Dismutase. 1 hit.
Gene3Dⁱ	2.60.40.200. 1 hit.
InterProⁱ	View protein in InterPro IPR036423. SOD-like_Cu/Zn_dom_sf. IPR024134. SOD_Cu/Zn_/chaperone. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom.
PANTHERⁱ	PTHR10003. PTHR10003. 1 hit.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00080. Sod_Cu. 1 hit.
SUPFAMⁱ	SSF49329. SSF49329. 1 hit.
PROSITEⁱ	View protein in PROSITE PS00332. SOD_CU_ZN_2. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

A0A0M9FAP3-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MNKTKTLLFT ALALGLSHQV LAQDLTVKMT DLQTGKPVGT IELSQNKYGV 
        60         70         80         90        100
VFTPELADLT PGMHGFHIHQ NASCASSEKD GKVVLGGAAG GHYDPEHTNK 
       110        120        130        140        150
HGFPWTDDNH KGDLPALFVS ANGLATNPVL APRLTLKELK GHAIMIHAGG 
       160        170 
DNHSDMPKAL GGGGARVACG VIQ

Length:173

Mass (Da):18,147

Last modified:December 9, 2015 - v1

Checksum:ⁱEA0E6951EAF66F01

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	LAFZ01000023 Genomic DNA. Translation: KPA53254.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_053987740.1. NZ_LAFZ01000023.1.

Genome annotation databases

EnsemblBacteriaⁱ	KPA53254; KPA53254; VT25_08475.
PATRICⁱ	fig\|48408.3.peg.339.

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
A0A0M9FAP3	P00446 V5F724 A0A0D8MV63 UPI0000112F48 F2PD73 UPI00076AC7CD UPI0000110ADC UPI0000111D07 UPI0000111D08 UPI0000111D09 +4	Photobacterium leiognathi Photobacterium leiognathi lrivu.4.1 Photobacterium leiognathi subsp. leiognathi Photobacterium leiognathi subsp. mandapamensis svers.1.1.	173	UniRef90_P00446	Cluster: Superoxide dismutase [Cu-Zn]	15

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
A0A0M9FAP3	P00446 V5F724 A0A0D8MV63 UPI0000112F48 F2PD73 UPI00076AC7CD UPI0000111D0B UPI0000112891 UPI0000111D07 UPI0000111D08 +1151	Photobacterium leiognathi Photobacterium leiognathi lrivu.4.1 Photobacterium leiognathi subsp. leiognathi Photobacterium leiognathi subsp. mandapamensis svers.1.1. Campylobacter sp. MIT 97-5078 Shewanella mangrovi Proteus sp. 08MAS0041 Proteus vulgaris Proteus hauseri ZMd44 Proteus penneri ATCC 35198 And more	173	UniRef50_P00446	Cluster: Superoxide dismutase [Cu-Zn]	1,162

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	LAFZ01000023 Genomic DNA. Translation: KPA53254.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_053987740.1. NZ_LAFZ01000023.1.

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	KPA53254; KPA53254; VT25_08475.
PATRICⁱ	fig\|48408.3.peg.339.

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd00305. Cu-Zn_Superoxide_Dismutase. 1 hit.
Gene3Dⁱ	2.60.40.200. 1 hit.
InterProⁱ	View protein in InterPro IPR036423. SOD-like_Cu/Zn_dom_sf. IPR024134. SOD_Cu/Zn_/chaperone. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom.
PANTHERⁱ	PTHR10003. PTHR10003. 1 hit.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00080. Sod_Cu. 1 hit.
SUPFAMⁱ	SSF49329. SSF49329. 1 hit.
PROSITEⁱ	View protein in PROSITE PS00332. SOD_CU_ZN_2. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	A0A0M9FAP3_PHOLD
Accessionⁱ	A0A0M9FAP3Primary (citable) accession number: A0A0M9FAP3
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	December 9, 2015
	Last sequence update:	December 9, 2015
	Last modified:	October 25, 2017
	This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termⁱ

Complete proteomeImported

UniProtKB - A0A0M9FAP3 (A0A0M9FAP3_PHOLD)

Your basket is currently empty. ⁱ

Superoxide dismutase [Cu-Zn]

Select a section on the left to see content.

Functionⁱ

Catalytic activityⁱ

Cofactorⁱ

GO - Molecular functionⁱ

Keywordsⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Molecule processing

Family & Domainsⁱ

Domains and Repeats

Sequence similaritiesⁱ

Keywords - Domainⁱ

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Caution

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - A0A0M9FAP3 (A0A0M9FAP3_PHOLD)

Your basket is currently empty. i <p>When browsing through different UniProt proteins, you can use the ‘basket’ to save them, so that you can back to find or analyse them later.<p><a href='/help/basket' target='_top'>More...</a></p>

Superoxide dismutase [Cu-Zn]

VT25_08475

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Caution

Your basket is currently empty. ⁱ

Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ