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Protein
Submitted name:

Paired box protein 7a isoform Pax7a-3

Gene

Pax7a-3

Organism
Paralichthys olivaceus (Bastard halibut) (Hippoglossus olivaceus)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi220 – 279HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinSAAS annotation, DNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Paired box protein 7a isoform Pax7a-3Imported
Gene namesi
Name:Pax7a-3Imported
OrganismiParalichthys olivaceus (Bastard halibut) (Hippoglossus olivaceus)Imported
Taxonomic identifieri8255 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataCarangariaPleuronectiformesPleuronectoideiParalichthyidaeParalichthys

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 166PairedInterPro annotationAdd BLAST133
Domaini218 – 278HomeoboxInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation, Paired boxPROSITE-ProRule annotationSAAS annotation

Family and domain databases

CDDicd00086 homeodomain, 1 hit
cd00131 PAX, 1 hit
Gene3Di1.10.10.10, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR001523 Paired_dom
IPR022106 Pax7_C
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PF00292 PAX, 1 hit
PF12360 Pax7, 1 hit
PRINTSiPR00027 PAIREDBOX
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SM00351 PAX, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
PS00034 PAIRED_1, 1 hit
PS51057 PAIRED_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0K2DRR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATLPGTVPR MMRPAPGQNY PRTGFPLEVS TPLGQGRVNQ LGGVFINGRP
60 70 80 90 100
LPNHIRHKIV EMAHHGIRPC VISRQLRVSH GCVSKILCRY QETGSIRPGA
110 120 130 140 150
IGGSKPRQVA TPDVEKRIEE YKRENPGMFS WEIRDKLLKD GVCDRSTVPS
160 170 180 190 200
GEASSVSSIS RVLRARFGKK DDEDDCDKKD EDGEKKTKHS IDGILGDKCN
210 220 230 240 250
RTDEGSDVDS EPDLPLKRKQ RRSRTTFTAE QLEELEKAFE RTHYPDIYTR
260 270 280 290 300
EELAQRTKLT EARVQVWFSN RRARWRKQAG ANQLAAFNHL LPGGFPPTGM
310 320 330 340 350
PTLPTYQLQE SGYPGTTLSQ EGGSTLHRPQ PLPPSSMHQG GLSADGSSAY
360 370 380 390 400
GLSSNRHSFS SYSDTFMSPS ASSNHMNSVG NGLSPQVSPT GFTFMYHVYT

FPYR
Length:404
Mass (Da):44,945
Last modified:November 11, 2015 - v1
Checksum:iA6513743AE0BF606
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KP323412 mRNA Translation: ALA23010.1

Similar proteinsi

Entry informationi

Entry nameiA0A0K2DRR8_PAROL
AccessioniPrimary (citable) accession number: A0A0K2DRR8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 11, 2015
Last sequence update: November 11, 2015
Last modified: April 25, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health