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Protein
Submitted name:

BMA-SWSN-1, isoform b

Gene

Bm1_20550

Organism
Brugia malayi (Filarial nematode worm)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
BMA-SWSN-1, isoform bImported
Gene namesi
Name:Bm1_20550Imported
Synonyms:Bma-swsn-1Imported
ORF Names:BM_Bm7304Imported
OrganismiBrugia malayi (Filarial nematode worm)Imported
Taxonomic identifieri6279 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaSpiruridaSpiruromorphaFilarioideaOnchocercidaeBrugia
Proteomesi
  • UP000006672 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini81 – 178SWIRMInterPro annotationAdd BLAST98
Domaini252 – 303SANTInterPro annotationAdd BLAST52

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili498 – 524Sequence analysisAdd BLAST27

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd00167 SANT, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001005 SANT/Myb
IPR017884 SANT_dom
IPR038044 SMARCC2
IPR032451 SMARCC_C
IPR007526 SWIRM
IPR032448 SWIRM-assoc
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR12802:SF38 PTHR12802:SF38, 6 hits
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 1 hit
PF04433 SWIRM, 1 hit
PF16495 SWIRM-assoc_1, 1 hit
PF16498 SWIRM-assoc_3, 1 hit
SMARTiView protein in SMART
SM00717 SANT, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
PROSITEiView protein in PROSITE
PS51293 SANT, 1 hit
PS50934 SWIRM, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0K0JRT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSKVAVRK SGQKRKREED DSTSIQDEED SRSGLTMVSI PKGKEKDVEY
60 70 80 90 100
SAPKSQKLTD LDEEGIKEGE DGNVIEQTHY IIIPSYAAWF DYNAIHQIEK
110 120 130 140 150
RGVPEFFNGR NKSKSPEVYM AYRNFMIDTY RLNPFEYLSS TACRRNLGGD
160 170 180 190 200
VCSILRVHSF LEQWGLINYQ VDSEARPAPV APPCTSHFMV LADTPMGIQP
210 220 230 240 250
IQPTPNLAQE KDDESTKDEG NVTVKIEKLG DAGLKTDMYA KHLATMKMRG
260 270 280 290 300
AAPNRDWTDQ ETLLLLEGLE MFKDDWNKVA DHVGSRTQDE CIMRFLQLPI
310 320 330 340 350
QDPYLEEGGA EAEILGPLAY QPMAFSQAGN PIMSTVAFLA SVVDPRVASK
360 370 380 390 400
AAKAALEEFA KMKEEVPPLV AEAHALNVEA ASAGGKIDGS AGLSVSGIAD
410 420 430 440 450
DRTDKDKGPE PMDTQSEEMK TCSSAEGNKD AGESNDRQKE DNKSKVSETV
460 470 480 490 500
QAAAAAALAA AAVKAKHLAA IEERRIKSLV AQLVETQMKK LEMKLRHFDE
510 520 530 540 550
LEAIMDKERE ALEYQRQQLI LERQSFHMDQ LRYLEQRAKH EAQSKLVAGG
560 570 580 590 600
QLPPSLPPGF EVSGPPQPQQ QVQVPAHSVG VSTSSVSSSC PPAVGLASMQ
610 620 630 640 650
AQMTHDSVQK MDTSETSTIA VSVAMPQVSQ QALVPASSAV TQPNITTASL
660 670 680 690 700
QTNISAVPPP QSSMTVGPPQ PGMTVVPPPQ TGMSAVPSQS NIAAIPTQVQ
710 720 730 740 750
QQHSQAQQHP QIQQPQQPTQ TIQPPPQQPT STTGTMNVPQ VMTVQPQQHL
760 770 780 790 800
PPPPQQQQQQ QAPPPQQQYQ QAPQQQPQLQ QQPYPPQGGY QPQQQYAQYA
810 820 830 840 850
QNTSPQQYPP QGYQNAPSQG YYGQPGTRPP YPQQYAQRPS YQQPMQAYGQ
860 870 880 890 900
PVRPSFPPTS AAAPPPGQSY GYPQGYPPQG PQYAPPGGYA HPQGQQAPPP
910 920
TSVPQPVESS DAATPPMHQG TPSNQ
Length:925
Mass (Da):100,911
Last modified:October 14, 2015 - v1
Checksum:i9AED0321C031E891
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LN856455 Genomic DNA Translation: CDQ05709.1

Genome annotation databases

EnsemblMetazoaiBm7304b; Bm7304b; WBGene00227565
WBParaSiteiBm7304b; Bm7304b; WBGene00227565

Similar proteinsi

Entry informationi

Entry nameiA0A0K0JRT2_BRUMA
AccessioniPrimary (citable) accession number: A0A0K0JRT2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2015
Last sequence update: October 14, 2015
Last modified: March 28, 2018
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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