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Protein
Submitted name:

DNA ligase OB-like domain/ATP dependent DNA ligase domain

Gene

Msub_12953

Organism
Marinobacter subterrani
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase OB-like domain/ATP dependent DNA ligase domainImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:Msub_12953Imported
OrganismiMarinobacter subterraniImported
Taxonomic identifieri1658765 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeMarinobacter
Proteomesi
  • UP000036102 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_500528988425 – 284Sequence analysisAdd BLAST260

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 199DNA_LIGASE_A3InterPro annotationAdd BLAST155
Domaini213 – 278DNA_ligase_OB_2InterPro annotationAdd BLAST66

Keywords - Domaini

SignalSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0J7JFN9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFRLLSTAL PVLVSLLFSA VAAAKPPELT LAKVYQKGMP LEGYWVSEKF
60 70 80 90 100
DGVRAYWTGN RLISRGGHEY RAPAWFTRGF PEHPLDGELW MGRGRFAELS
110 120 130 140 150
GAVRKLVPVD QEWRKIRFMV FDFPVSGMPF DQRLLRLQAT VARVGSPFLA
160 170 180 190 200
VVRQQRATTH EALMARLDAI VRAGAEGLML RRGSSVYHAG RSDDLLKVKH
210 220 230 240 250
YRDAEAVVIR QLPGEGKYEG MMGSLLVELE NGRRFRIGSG FSDAERASPP
260 270 280
EIGAVITFKY YGHTATGLPR FASFLRVRDD EPPR
Length:284
Mass (Da):31,884
Last modified:October 14, 2015 - v1
Checksum:iB1C39B88CC6D886F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LFBU01000001 Genomic DNA. Translation: KMQ76739.1.
RefSeqiWP_048496670.1. NZ_LFBU01000001.1.

Genome annotation databases

EnsemblBacteriaiKMQ76739; KMQ76739; Msub_12953.
PATRICifig|1658765.3.peg.2980.

Similar proteinsi

Entry informationi

Entry nameiA0A0J7JFN9_9ALTE
AccessioniPrimary (citable) accession number: A0A0J7JFN9
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2015
Last sequence update: October 14, 2015
Last modified: November 22, 2017
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported