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Protein
Submitted name:

Quorum-sensing regulator of virulence HapR

Gene

VCE_000577

Organism
Vibrio cholerae B33
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi52 – 71H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Quorum-sensing regulator of virulence HapRImported
Gene namesi
ORF Names:VCE_000577Imported
OrganismiVibrio cholerae B33Imported
Taxonomic identifieri417400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000004007 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  • protein-DNA complex Source: CollecTF

Expressioni

Gene expression databases

CollecTFiEXPREG_00000130.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 89HTH tetR-typeInterPro annotationAdd BLAST61

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR001647. HTH_TetR.
IPR036271. Tet_transcr_reg_TetR-rel_C_sf.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0H3Q915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNQQLNWQG YTPMDASIEK RPRTRLSPQK RKLQLMEIAL EVFAKRGIGR
60 70 80 90 100
GGHADIAEIA QVSVATVFNY FPTREDLVDD VLNFVVRQYS NFLTDHIDLD
110 120 130 140 150
LDVKTNLQTL CKEMVKLAMT DCHWLKVWFE WSASTRDEVW PLFVSTNRTN
160 170 180 190 200
QLLIRNMFMK AMERGELCEK HDVDNMASLF HGIFYSIFLQ VNRLGEQEAV
210
YKLADSYLNM LCIYKN
Length:216
Mass (Da):25,267
Last modified:September 16, 2015 - v1
Checksum:iAB39BEA1D857EA01
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACHZ01000012 Genomic DNA. Translation: EEO18685.1.

Genome annotation databases

EnsemblBacteriaiEEO18685; EEO18685; VCE_000577.

Similar proteinsi

Entry informationi

Entry nameiA0A0H3Q915_VIBCL
AccessioniPrimary (citable) accession number: A0A0H3Q915
Entry historyiIntegrated into UniProtKB/TrEMBL: September 16, 2015
Last sequence update: September 16, 2015
Last modified: November 22, 2017
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported