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Protein
Submitted name:

Sialidase

Gene

nanJ

Organism
Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi225Calcium 1Combined sources1
Metal bindingi226Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi281Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi330Calcium 2Combined sources1
Metal bindingi331Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi337Calcium 2Combined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
SialidaseImported
Gene namesi
Name:nanJImported
Ordered Locus Names:CPF_0532Imported
OrganismiClostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)Imported
Taxonomic identifieri195103 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000001823 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500260283627 – 1173Sequence analysisAdd BLAST1147

Interactioni

Protein-protein interaction databases

STRINGi195103.CPF_0532.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2V73X-ray2.20A/B181-367[»]
2VO8X-ray1.70A939-1081[»]
ProteinModelPortaliA0A0H2YT71.
SMRiA0A0H2YT71.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 181F5/8 type CInterPro annotationAdd BLAST146
Domaini1088 – 1173Fibronectin type-IIIInterPro annotationAdd BLAST86

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

KOiK01186.
OMAiYEIHAIN.

Family and domain databases

CDDicd00063. FN3. 1 hit.
Gene3Di2.60.120.260. 1 hit.
2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR008965. Carb-bd_dom.
IPR013320. ConA-like_dom.
IPR000421. FA58C.
IPR003961. FN3_dom.
IPR036116. FN3_sf.
IPR008979. Galactose-bd-like.
IPR004124. Glyco_hydro_33_N.
IPR013783. Ig-like_fold.
IPR011040. Sialidase.
IPR026856. Sialidase_fam.
IPR021984. Sialidase_pen_C.
IPR036278. Sialidase_sf.
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiView protein in Pfam
PF13088. BNR_2. 1 hit.
PF00754. F5_F8_type_C. 1 hit.
PF02973. Sialidase. 1 hit.
PF12135. Sialidase_penC. 1 hit.
SMARTiView protein in SMART
SM00060. FN3. 1 hit.
SUPFAMiSSF49265. SSF49265. 1 hit.
SSF49384. SSF49384. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
PROSITEiView protein in PROSITE
PS50022. FA58C_3. 1 hit.
PS50853. FN3. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0H2YT71-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSKKIIATL VASLVISNMG GYLVKANPNV NHKAVIIEDR QAIIETAIPQ
60 70 80 90 100
SEMTASATSE EGQDPASSAI DGNTNTMWHT KWNGSDALPQ SLSVNLGSSR
110 120 130 140 150
KVSSIAITPR TSGNNGFITK YEIHAINNGV EALVAEGTWE ENNLVKTVTF
160 170 180 190 200
DSPIDAEEIK ITAIQGVGGF ASIAELNVYE IKGEVDEIAN YGNLKITKEE
210 220 230 240 250
ERVNITGDLE KFSSLEEGTI VTRFNMNDTS IQSLIGLSDG NKANNYFSLY
260 270 280 290 300
VSGGKVGYEL RRQEGNGDFN VHHSADVTFN RGINTLALKI EKGIGAKIFL
310 320 330 340 350
NGSLVKTVSD PNIKFLNAIN LNSGFIGKTD RANGYNEYLF RGNIDFMNIY
360 370 380 390 400
DKPVSDNYLL RKTGETKAPL EDSLLPDDVY KTQPVELFYP GYLESRGYRI
410 420 430 440 450
PALETTKKGT VLASIDVRNN GDHDAPNNNI DVGIRRKEVN GEWEEGKVIL
460 470 480 490 500
DYPGKSAAID TSLMSATIEE NGIEKERIFL IVTHFPEGYG FPNTEGGSGY
510 520 530 540 550
REIDGKYYFI LKDAQNNEYT VREDGIVYNS EGNQTDYVMK NDKTLIQNGE
560 570 580 590 600
EVGNALLSNS PLKAVGTAHI EMIYSDDDGK TWSEPEDLNP GLKKEWMKFF
610 620 630 640 650
GTAPGKGIQI KNGEHKDRLI FPIYYTNQNN FQSSAVIYSD DFGETWKLGE
660 670 680 690 700
SPIDTASVSS ETVSSGTQLT ECQVVEMPNG QLKLFMRNTG SYTRIATSFD
710 720 730 740 750
GGATWHDEVP EDTSLREPYC QLSVINYSGK INGKDAIIFS NPDASSRVNG
760 770 780 790 800
SVKVGLINEN GTYDNGEPRY EFDWIYNKTV KPGSFAYSCL TELPDGNLGL
810 820 830 840 850
FYEGEGAGRM AYTEFDLNYL KFNASEDSPS ASVQSIEVLD EDLAYNSGEE
860 870 880 890 900
VSIKVNFNQL VSIIGDRKIT LDIGGVDVPL NMVNYEGKSS AIFKGTIPEG
910 920 930 940 950
INQGNYEIKL KENNTLELNT VYNKVSTFNG LDNTGINVQI GELKTTVGNS
960 970 980 990 1000
TIKVNDEVQV GSAFEAILGI EGLNGDTEVY SAEYLFEYNA EAFILNEITS
1010 1020 1030 1040 1050
FNDSLFVKSK EVEPGKVRIL VASLGNEIEK DSDLVKVNLT PKISSELEVL
1060 1070 1080 1090 1100
GLTTALVGAG DGNTHDLELS SKEVKINEEA SGEIVVNPVQ NFEIPEINKK
1110 1120 1130 1140 1150
NVKLTWNAPI TTEGLEGYVI YKDGKKLSEV PAESTEFVVS KLNRHTIYNF
1160 1170
KVAAKYSNGE LSAKESKTIR TAR
Length:1,173
Mass (Da):128,883
Last modified:September 16, 2015 - v1
Checksum:iD5A7CC27735851FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000246 Genomic DNA. Translation: ABG84247.1.
RefSeqiWP_011590241.1. NC_008261.1.

Genome annotation databases

EnsemblBacteriaiABG84247; ABG84247; CPF_0532.
GeneIDi29572343.
KEGGicpf:CPF_0532.

Similar proteinsi

Entry informationi

Entry nameiA0A0H2YT71_CLOP1
AccessioniPrimary (citable) accession number: A0A0H2YT71
Entry historyiIntegrated into UniProtKB/TrEMBL: September 16, 2015
Last sequence update: September 16, 2015
Last modified: October 25, 2017
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported