Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

RpiR family transcriptional regulator

Gene

APECO18_16965

Organism
Escherichia coli APEC O18
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi50 – 69H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RpiR family transcriptional regulatorImported
Gene namesi
ORF Names:APECO18_16965Imported
OrganismiEscherichia coli APEC O18Imported
Taxonomic identifieri1401688 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia

Structurei

3D structure databases

ProteinModelPortaliA0A0G3J997.
SMRiA0A0G3J997.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 90HTH rpiR-typeInterPro annotationAdd BLAST77
Domaini134 – 274SISInterPro annotationAdd BLAST141

Family and domain databases

CDDicd05013. SIS_RpiR. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR000281. HTH_RpiR.
IPR035472. RpiR-like_SIS.
IPR001347. SIS.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF01418. HTH_6. 1 hit.
PF01380. SIS. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS51071. HTH_RPIR. 1 hit.
PS51464. SIS. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0G3J997-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQSEFDSAL PNGIGLAPYL RMKQEGMTEN ESRIVEWLLK PGNLSCAPAI
60 70 80 90 100
KDVAEALAVS EAMIVKVSKL LGFSGFRNLR SALEDYFSQS EQVLPSELAF
110 120 130 140 150
DEAPQDVVNK VFNITLRTIM EGQSIVNVDE IHRAARFFYQ ARQRDLYGAG
160 170 180 190 200
GSNAICADVQ HKFLRIGVRC QAYPDAHIMM MSASLLQEGD VVLVVTHSGR
210 220 230 240 250
TSDVKAAVEL AKKNGAKIIC ITHSYHSPIA KLADYIICSP APETPLLGRN
260 270 280 290
ASARILQLTL LDAFFVSVAQ LNIEQANINM QKTGAIVDFF SPGALK
Length:296
Mass (Da):32,362
Last modified:September 16, 2015 - v1
Checksum:i7946848F0798E200
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006830 Genomic DNA. Translation: AKK35696.1.

Similar proteinsi

Entry informationi

Entry nameiA0A0G3J997_ECOLX
AccessioniPrimary (citable) accession number: A0A0G3J997
Entry historyiIntegrated into UniProtKB/TrEMBL: September 16, 2015
Last sequence update: September 16, 2015
Last modified: September 27, 2017
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)