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Protein
Submitted name:

Large proline-rich protein BAG6

Gene

Bag6

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Large proline-rich protein BAG6Imported
Gene namesi
Name:Bag6Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi71064. Bag6.

Expressioni

Gene expression databases

ExpressionAtlasiA0A0G2K7C1. baseline and differential.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini17 – 7761Ubiquitin-likeInterPro annotationAdd
BLAST

Phylogenomic databases

GeneTreeiENSGT00390000016199.

Family and domain databases

InterProiIPR021925. DUF3538.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF12057. DUF3538. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
SMARTiSM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0A0G2K7C1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPSDSTSTA MEEPDSLEVL VKTLDSQTRT FIVGAQMNVK EFKEHIAASV
60 70 80 90 100
SIPSEKQRLI YQGRVLQDDK KLQDYNVGGK VIHLVERAPP QTQLPSGASS
110 120 130 140 150
GTGSASATHG GGPLPGTRGP GASGHDRNAN SYVMVGTFNL PSEPRVRLVM
160 170 180 190 200
AQHMIRDIQT LLSRMECRGG TQAQASQPPP QTPTVASETV ALNSQTSEPV
210 220 230 240 250
ESEAPPREPM ESEEMEERPP TQTPELPPSG PAPAGPAPAP ETNAPNHPSP
260 270 280 290 300
AEHVEVLQEL QRLQRRLQPF LQRYCEVLGA AATTDYNNNH EGREEDQRLI
310 320 330 340 350
NLVGESLRLL GNTFVALSDL RCNLACAPPR HLHVVRPMSH YTTPMVLQQA
360 370 380 390 400
AIPIQINVGT TVTMTGNGAR PPPAPGAEAA SPGSGQASSL PPSSATVDSS
410 420 430 440 450
TEGAPPPGPA PPPATSHPRV IRISHQSVEP VVMMHMNIQD SGAQPGGVPS
460 470 480 490 500
APTGPLGPPG HGQSLGQQVP GFPTAPTRVV IARPTPPQAR PSHPGGPPVS
510 520 530 540 550
GALQGAGLGT NTSLAQMVSG LVGQLLMQPV LVAQGTPGMA PASASAPATA
560 570 580 590 600
QAQAPAPAPA PAPAPATASA SAGTTNTATT AGPAPGGPAQ PPPPQPSAAD
610 620 630 640 650
LQFSQLLGNL LGPAGPGAGG PSLASPTITV AVPGVPAFLQ GMTEFLQASQ
660 670 680 690 700
AAPPPPPPPP PPPPAPEQQT TPPPGSPSGG TASPGGLGPE SLPPEFFTSV
710 720 730 740 750
VQGVLSSLLG SLGARAGSSE SIAAFIQRLS GSSNIFEPGA DGALGFFGAL
760 770 780 790 800
LSLLCQNFSM VDVVMLLHGH FQPLQRLQPQ LRSFFHQHYL GGQEPTSSNI
810 820 830 840 850
RMATHTLITG LEEYVRESFS LVQVQPGVDI IRTNLEFLQE QFNSIAAHVL
860 870 880 890 900
HCTDSGFGAR LLELCNQGLF ECLALNLHCL GGQQMELAAV INGRIRRMSR
910 920 930 940 950
GVNPSLVSWL TTMMGLRLQV VLEHMPVGPD AILRYVRRIG DPPQALPEEP
960 970 980 990 1000
MEVQGAERTS PEPQREDASP APGTTAEEAM SRGPPPAPEG GSRDEQDGAS
1010 1020 1030 1040 1050
ADAEPWAAAV PPEWVPIIQQ DIQSQRKVKP QPPLSDAYLS GMPAKRRKLR
1060 1070
SDIQKRLQED PNYSPQRFPN AHRAFADDP
Length:1,079
Mass (Da):112,882
Last modified:July 22, 2015 - v1
Checksum:i490D90D60F40EAF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094348 Genomic DNA. No translation available.
RefSeqiXP_006256155.1. XM_006256093.2.
UniGeneiRn.203343.

Genome annotation databases

EnsembliENSRNOT00000085598; ENSRNOP00000074143; ENSRNOG00000000851.
GeneIDi94342.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094348 Genomic DNA. No translation available.
RefSeqiXP_006256155.1. XM_006256093.2.
UniGeneiRn.203343.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000085598; ENSRNOP00000074143; ENSRNOG00000000851.
GeneIDi94342.

Organism-specific databases

CTDi7917.
RGDi71064. Bag6.

Phylogenomic databases

GeneTreeiENSGT00390000016199.

Gene expression databases

ExpressionAtlasiA0A0G2K7C1. baseline and differential.

Family and domain databases

InterProiIPR021925. DUF3538.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF12057. DUF3538. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
SMARTiSM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. "Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues."
    Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C., Olsen J.V.
    Nat. Commun. 3:876-876(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (JUN-2015) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiA0A0G2K7C1_RAT
AccessioniPrimary (citable) accession number: A0A0G2K7C1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: February 17, 2016
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.