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Protein
Submitted name:

Protein Btaf1

Gene

Btaf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Btaf1Imported
Gene namesi
Name:Btaf1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1564130. Btaf1.

Expressioni

Gene expression databases

ExpressionAtlasiA0A0G2K1N4. baseline and differential.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1277 – 1452Helicase ATP-bindingInterPro annotationAdd BLAST176
Domaini1635 – 1789Helicase C-terminalInterPro annotationAdd BLAST155

Phylogenomic databases

GeneTreeiENSGT00860000133750.

Family and domain databases

Gene3Di1.25.10.10. 5 hits.
3.40.50.300. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR022707. DUF3535.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
[Graphical view]
PfamiPF12054. DUF3535. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 5 hits.
SSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0A0G2K1N4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVSRLDRLF ILLDTGTTPV TRKAAAQQLG EVVKLHPHEL NNLLSKVLIY
60 70 80 90 100
LRSANWDTRI AAGQAVEAIV KNVPEWNPVP RTKQEPTECS MEDSSTTDRL
110 120 130 140 150
NFDRFDICRL LQHGASLLGS AGAEFEVQDE KSGEVDPKER IARQRKLLQK
160 170 180 190 200
KLGLNMGEAI GMSTEELFND EDLDYTPTSA ALVNKQSTLQ AAELIDSEFR
210 220 230 240 250
AGMSNRQKNK AKRMAKLFAK QRSRDAVETN EKSNDSTDGE PEEKRRKVAN
260 270 280 290 300
VVINQTASDA KVLIDNVPES SSFIEETNEW PLESFCEELC NDLFNPSWEV
310 320 330 340 350
RHGAGTGLRE ILKAHGKSGG KMGDSTLEEM IQQHQEWLED LVIRLLCVFA
360 370 380 390 400
LDRFGDFVSD EVVAPVRETC AQTLGVVLKH MNETGVHKTV DVLLKLLTQE
410 420 430 440 450
QWEVRHGGLL GIKYALAVRQ DVINTLLPKV LTRIIEGLQD LDDDVRAVAA
460 470 480 490 500
ASLVPVVESL VYLQTQKVPS IINTLWDSLL ELDDLTASTN SIMTLLSSML
510 520 530 540 550
TYPQVQQCSI QQSLTVLVPR VWPFLHHTIS SVRRAALETL FTLLSTQDQN
560 570 580 590 600
SSSWLIPILS DMLRHIFQFC VLESSQEILD LIHKVWMELL SKASVQYVVA
610 620 630 640 650
AACPWMGAWL CLMMQPSHLP IDLNMLLEVK ARTKEKTGGK VRQGQMQSKE
660 670 680 690 700
VLQEYIAGAD TIMEDPATRD FVVMRARMMA AKLLGALCCC ICDPGVNMVN
710 720 730 740 750
QEIKPAESLG QLLLFHLNSK SALQRISAAL VICEWAALQK ECKAVTLAVQ
760 770 780 790 800
PRLLDILSEH LYYDEIAVPF TRMQNECKQF ISSLADAHIE VGNRVNNNVL
810 820 830 840 850
TIDQANDLVT TLFNEVTSTF DLNPQVLQQL DSKRHQVQMT VAETNQEWQV
860 870 880 890 900
LQLRVHTFAA CAVVSLQQLP EKLNPIIKPL METIKKEENT LVQNYAAQYI
910 920 930 940 950
AKLLQQCTTR TPCPNSKVIK NLCSSLCVDP YLTPCVTCPV PTQSGQENSK
960 970 980 990 1000
GSNSEKDGMH HTVTKHRGII TLYRHQKAAF AITSRRGPIP KAIKAQIADL
1010 1020 1030 1040 1050
PAGSSGNILV ELDEGQKPYL VQRRGAEFAL TTVVKHFGAE MALKLPHLWD
1060 1070 1080 1090 1100
AMVGPLKTMI DLNNFDGKSL LERGDAPAQE LVNSLQVFET AAASMDSELH
1110 1120 1130 1140 1150
PLLVQHLPHL YMCLQYPSTA VRHMAARCVG VMSKIATMET MNIFLEKVLP
1160 1170 1180 1190 1200
WLGAIDDNVK QEGAIEALAC VMEQLDVGIV PYIVLLVVPV LGRMSDQTDS
1210 1220 1230 1240 1250
VRFMATQCFA TLIRLMPLEA GIPDPPNMSE ELIQLKAKER HFLEQLLDGK
1260 1270 1280 1290 1300
KLENYKIPVP INAELRKYQQ DGVNWLAFLN KYKLHGILCD DMGLGKTLQS
1310 1320 1330 1340 1350
ICILAGDHCQ RAQEYARSKL AECMPLPSLV VCPPTLTGHW VDEVGKFCSR
1360 1370 1380 1390 1400
EYLNPLHYTG PPTERIRLQH QVKRHNLIVA SYDVVRNDID FFRNIKFNYC
1410 1420 1430 1440 1450
ILDEGHVIKN GKTKLSKAVK QLTANYRIIL SGTPIQNNVL ELWSLFDFLM
1460 1470 1480 1490 1500
PGFLGTERQF AARYGKPILA SRDARSSSRE QEAGVLAMDA LHRQVLPFLL
1510 1520 1530 1540 1550
RRMKEDVLQD LPPKIIQDYY CTLSPLQVQL YEDFAKSRAK CDVDETVSSA
1560 1570 1580 1590 1600
ALSEETEKPK LKATGHVFQA LQYLRKLCNH PALVLTPQHP EFKNTTEKLA
1610 1620 1630 1640 1650
VQNSSLHDIQ HAPKLSALKQ LLLDCGLGNG TSSESGTESV VAQHRILIFC
1660 1670 1680 1690 1700
QLKSMLDIVE HDLLKPHLPS VTYLRLDGSI PPGQRHSIVS RFNNDPSIDV
1710 1720 1730 1740 1750
LLLTTHVGGL GLNLTGADTV VFVEHDWNPM RDLQAMDRAH RIGQKRVVNV
1760 1770 1780 1790 1800
YRLITRGTLE EKIMGLQKFK MNIANTVISQ ENSSLQSMGT DQLLDLFTLD
1810 1820 1830 1840
KDGKAEKADS STSGKASMKS VLENLSDLWD AEQYDSEYNL ETFMRSLE
Length:1,848
Mass (Da):206,930
Last modified:July 22, 2015 - v1
Checksum:i422E7F08226C88A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094246 Genomic DNA. No translation available.
RefSeqiXP_006231394.1. XM_006231332.3.
UniGeneiRn.1237.

Genome annotation databases

EnsembliENSRNOT00000081786; ENSRNOP00000071913; ENSRNOG00000017938.
GeneIDi368042.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094246 Genomic DNA. No translation available.
RefSeqiXP_006231394.1. XM_006231332.3.
UniGeneiRn.1237.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000081786; ENSRNOP00000071913; ENSRNOG00000017938.
GeneIDi368042.

Organism-specific databases

CTDi9044.
RGDi1564130. Btaf1.

Phylogenomic databases

GeneTreeiENSGT00860000133750.

Gene expression databases

ExpressionAtlasiA0A0G2K1N4. baseline and differential.

Family and domain databases

Gene3Di1.25.10.10. 5 hits.
3.40.50.300. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR022707. DUF3535.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
[Graphical view]
PfamiPF12054. DUF3535. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 5 hits.
SSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0G2K1N4_RAT
AccessioniPrimary (citable) accession number: A0A0G2K1N4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: November 30, 2016
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.