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Protein

Putative HTH-type transcriptional regulatory protein EO92_04530

Gene

EO92_04530

Organism
Methanosarcina sp. 2.H.A.1B.4
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Putative HTH-type transcriptional regulatory protein EO92_04530UniRule annotation
Gene namesi
ORF Names:EO92_04530Imported
OrganismiMethanosarcina sp. 2.H.A.1B.4Imported
Taxonomic identifieri1483600 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000034052 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini132 – 190HTH cro/C1-typeInterPro annotationAdd BLAST59

Phylogenomic databases

OrthoDBiPOG093Z05RI.

Family and domain databases

CDDicd00093. HTH_XRE. 1 hit.
HAMAPiMF_00584. HTH_type_cro_C1. 1 hit.
InterProiView protein in InterPro
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom_sf.
IPR020886. Tscrpt_reg_HTH_Cro/C1.
PfamiView protein in Pfam
PF01381. HTH_3. 1 hit.
SMARTiView protein in SMART
SM00530. HTH_XRE. 1 hit.
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiView protein in PROSITE
PS50943. HTH_CROC1. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0F8EIG6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKEVLIHQI IDVLSRAGFA LSDRCNIRPR SFDVAARKYE TLLLCKVLFN
60 70 80 90 100
IDGLNEETAR EMKYLAEYLG GSAIVVGAKT RDQMLEDSVV YMRYDILALN
110 120 130 140 150
VQTLHDYFVE NIPPLVSAAP GGLYVAIEGD LLRKSRTDQS MSLGTLASMV
160 170 180 190 200
GVSRRTISKY EEEGMDASID VVLQLEDIFG IELARPIDIL KSCGSRKPRK
210 220 230 240 250
KAEPEKEEPQ VKHNVLLPED LILNTISMLG YDVLPTAQAP FKAISRDKSS
260 270 280 290 300
VILTGVSEFN TTVIKRAHLM SSISCITETQ SVFIINGHSK LKSVENTVLI
310 320
EKKELDKISD SQELLEFIEE RKEPQSDG
Length:328
Mass (Da):36,610
Last modified:July 22, 2015 - v1
Checksum:i7B1C02229798E12D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JJOV01000090 Genomic DNA. Translation: KKG07820.1.
RefSeqiWP_048132941.1. NZ_JJOV01000090.1.

Genome annotation databases

EnsemblBacteriaiKKG07820; KKG07820; EO92_04530.
PATRICifig|1483600.3.peg.1003.

Similar proteinsi

Entry informationi

Entry nameiA0A0F8EIG6_9EURY
AccessioniPrimary (citable) accession number: A0A0F8EIG6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: January 31, 2018
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported