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Protein

Succinate dehydrogenase iron-sulfur subunit

Gene

frdB

Organism
Peptococcaceae bacterium BRH_c4a
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Succinate + a quinone = fumarate + a quinol.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • [2Fe-2S] clusterUniRule annotationNote: Binds 1 [2Fe-2S] cluster.UniRule annotation
  • [3Fe-4S] clusterUniRule annotationNote: Binds 1 [3Fe-4S] cluster.UniRule annotation
  • [4Fe-4S] clusterUniRule annotationNote: Binds 1 [4Fe-4S] cluster.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Ligand2Fe-2SUniRule annotation, 3Fe-4SUniRule annotation, 4Fe-4SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Succinate dehydrogenase iron-sulfur subunitUniRule annotation (EC:1.3.5.1UniRule annotation)
Gene namesi
Name:frdBImported
ORF Names:VR68_03195Imported
OrganismiPeptococcaceae bacterium BRH_c4aImported
Taxonomic identifieri1629716 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceae
Proteomesi
  • UP000033439 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 942Fe-2S ferredoxin-typeInterPro annotationAdd BLAST78
Domaini141 – 1704Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30

Sequence similaritiesi

Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.UniRule annotation

Family and domain databases

Gene3Di1.10.1060.10. 1 hit.
3.10.20.30. 1 hit.
InterProiView protein in InterPro
IPR036010. 2Fe-2S_ferredoxin-like_sf.
IPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR017896. 4Fe4S_Fe-S-bd.
IPR012675. Beta-grasp_dom_sf.
IPR009051. Helical_ferredxn.
IPR004489. Succ_DH/fum_Rdtase_Fe-S.
IPR025192. Succ_DH/fum_Rdtase_N.
PfamiView protein in Pfam
PF13085. Fer2_3. 1 hit.
PF13183. Fer4_8. 1 hit.
SUPFAMiSSF46548. SSF46548. 1 hit.
SSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR00384. dhsB. 1 hit.
PROSITEiView protein in PROSITE
PS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0F2NMG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIQRKFSIF RYNPNTPDVK PFMQEYVIEE PQSMTIFTAL NKIREEQDPS
60 70 80 90 100
LMFDFVCRAA ICGSCAMVIN GKPRLACKTL TTDFSGTITL MPLPVFKLVG
110 120 130 140 150
DLSVDTGAWF RHLSLKTKAW VHTDKEFDPN AAEERMDNET ALLIYEAERC
160 170 180 190 200
IECGCCIAGC VTANIREDFL GAAGINRVAR FMVDPRDERS GNEYFEVIGS
210 220 230 240
DEGAFGCMGL MACDDNCPMQ LPLQLQLSFV RRKMLAFGLS K
Length:241
Mass (Da):27,063
Last modified:June 24, 2015 - v1
Checksum:i2A8DD9D0721D2ECA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LADN01000021 Genomic DNA. Translation: KJS02360.1.

Genome annotation databases

PATRICifig|1629716.3.peg.2627.

Similar proteinsi

Entry informationi

Entry nameiA0A0F2NMG1_9FIRM
AccessioniPrimary (citable) accession number: A0A0F2NMG1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 24, 2015
Last sequence update: June 24, 2015
Last modified: December 20, 2017
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported