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Protein

30S ribosomal protein S4

Gene

rpsD_2

Organism
Chlamydia trachomatis
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.UniRule annotation
With S5 and S12 plays an important role in translational accuracy.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4UniRule annotation
Gene namesi
Name:rpsD_2Imported
Synonyms:rpsDUniRule annotationImported, rpsD_1Imported
ORF Names:ERS015770_00959Imported, ERS015772_00448Imported, ERS177788_00466Imported
OrganismiChlamydia trachomatisImported
Taxonomic identifieri813 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
Proteomesi
  • UP000038595 Componenti: Unassembled WGS sequence
  • UP000045537 Componenti: Unassembled WGS sequence
  • UP000044845 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini93 – 154S4 RNA-bindingInterPro annotationAdd BLAST62

Sequence similaritiesi

Belongs to the universal ribosomal protein uS4 family.UniRule annotation

Family and domain databases

CDDicd00165. S4. 1 hit.
Gene3Di3.10.290.10. 1 hit.
HAMAPiMF_01306_B. Ribosomal_S4_B. 1 hit.
InterProiView protein in InterPro
IPR022801. Ribosomal_S4/S9.
IPR001912. Ribosomal_S4/S9_N.
IPR005709. Ribosomal_S4_bac-type.
IPR002942. S4_RNA-bd.
IPR036986. S4_RNA-bd_sf.
PANTHERiPTHR11831. PTHR11831. 1 hit.
PTHR11831:SF4. PTHR11831:SF4. 1 hit.
PfamiView protein in Pfam
PF00163. Ribosomal_S4. 1 hit.
PF01479. S4. 1 hit.
SMARTiView protein in SMART
SM01390. Ribosomal_S4. 1 hit.
SM00363. S4. 1 hit.
TIGRFAMsiTIGR01017. rpsD_bact. 1 hit.
PROSITEiView protein in PROSITE
PS50889. S4. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0E9CAZ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARYCGPKNR IARRFGANIF GRGRNPLLRK PNPPGQHGMQ RKKKSDYGLQ
60 70 80 90 100
LEEKQKLKAC YGMILEKQLV KAYKEVINKQ RNVAQMFLEK FECRLDNIIY
110 120 130 140 150
RLGFAKTIFA AQQLVSHGHV LVNGKKVDRR SFFVRPGMQI SLKEKSKRLA
160 170 180 190 200
IVTESLENKD QSSLPAYLSL DKAAFKGELV VAPELDQIAS QLPLPVNVSV

ICEFLSHRT
Length:209
Mass (Da):23,814
Last modified:June 24, 2015 - v1
Checksum:i593B2B25989EB20F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CSTN01000004 Genomic DNA. Translation: CPR51668.1.
CSTQ01000033 Genomic DNA. Translation: CPR70708.1.
CTBL01000006 Genomic DNA. Translation: CQB85316.1.
RefSeqiWP_009873178.1. NZ_CVNT01000001.1.

Genome annotation databases

EnsemblBacteriaiCPR51668; CPR51668; ERS015772_00448.
CPR70708; CPR70708; ERS015770_00959.
CQB85316; CQB85316; ERS177788_00466.
GeneIDi35555137.
PATRICifig|813.31.peg.689.

Similar proteinsi

Entry informationi

Entry nameiA0A0E9CAZ5_CHLTH
AccessioniPrimary (citable) accession number: A0A0E9CAZ5
Entry historyiIntegrated into UniProtKB/TrEMBL: June 24, 2015
Last sequence update: June 24, 2015
Last modified: March 28, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported