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Protein

30S ribosomal protein S12

Gene

rpsL

Organism
Xanthomonas campestris
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.UniRule annotation
With S4 and S5 plays an important role in translational accuracy.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation, tRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12UniRule annotation
Gene namesi
Name:rpsLUniRule annotation
ORF Names:ADT24_11425Imported, AE925_07120Imported, XB05_21675Imported
OrganismiXanthomonas campestrisImported
Taxonomic identifieri339 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000033040 Componenti: Chromosome
  • UP000037111 Componenti: Unassembled WGS sequence
  • UP000036740 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA0A0E3UGI2
SMRiA0A0E3UGI2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS12 family.UniRule annotation

Family and domain databases

CDDicd03368 Ribosomal_S12, 1 hit
HAMAPiMF_00403_B Ribosomal_S12_B, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR005679 Ribosomal_S12_bac
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
PRINTSiPR01034 RIBOSOMALS12
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00981 rpsL_bact, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0E3UGI2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTINQLVRK PRQATTYKSA SPALDKCPQR RGVCTRVYTT TPKKPNSALR
60 70 80 90 100
KVAKVRLTNQ EEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG
110 120
SLDAAGVAKR RQGRSKYGAK RPKS
Length:124
Mass (Da):13,753
Last modified:June 24, 2015 - v1
Checksum:iBB5665A6E17F7FE9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP011256 Genomic DNA Translation: AKC81061.1
LHBP01000034 Genomic DNA Translation: KOB19591.1
LHUK01000230 Genomic DNA Translation: KOR70572.1
RefSeqiWP_002811712.1, NZ_LHUK01000230.1

Genome annotation databases

EnsemblBacteriaiAKC81061; AKC81061; XB05_21675
KOB19591; KOB19591; AE925_07120
KOR70572; KOR70572; ADT24_11425
GeneIDi34206033
PATRICifig|339.50.peg.4698

Similar proteinsi

Entry informationi

Entry nameiA0A0E3UGI2_XANCA
AccessioniPrimary (citable) accession number: A0A0E3UGI2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 24, 2015
Last sequence update: June 24, 2015
Last modified: March 28, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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