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Protein

Putative HTH-type transcriptional regulatory protein MSSAC_3217

Gene

MSSAC_3217

Organism
Methanosarcina siciliae C2J
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotationImported
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Putative HTH-type transcriptional regulatory protein MSSAC_3217UniRule annotation
Gene namesi
ORF Names:MSSAC_3217Imported
OrganismiMethanosarcina siciliae C2JImported
Taxonomic identifieri1434118 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000033123 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini132 – 190HTH cro/C1-typeInterPro annotationAdd BLAST59

Phylogenomic databases

KOiK07728
OrthoDBiPOG093Z05RI

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
HAMAPiMF_00584 HTH_type_cro_C1, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
IPR020886 Tscrpt_reg_HTH_Cro/C1
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0E3PQZ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKEVLIHQI IDVLSRAGFA LSDRCNIRPR SFDVAARKDE TLLLCKVLFN
60 70 80 90 100
IDGLNEETAR EMKYLAEYLG GSAIVVGAKT RDQMLEDSVI YMRYDILALN
110 120 130 140 150
VQTLYDYFVE NVKPLVSAAP GGLYVSIEGD LLKKARTGQA MSLGTLASMV
160 170 180 190 200
GVSRRTISKY EEEGMDASID VVLQLEDIFG VELARPIDIL KSCGSRKSRK
210 220 230 240 250
KAEPEKEEPQ VKHNVLLPED LILNMISMLG YDVLPTAQAP FKAISRDESS
260 270 280 290 300
VILTGVSEFN TTVIKRAHLM SSISCITETQ SVFIINGRSK LKSVENTVLI
310 320
EKKELDKIGD SQELIEFIDE RKETHSGA
Length:328
Mass (Da):36,468
Last modified:June 24, 2015 - v1
Checksum:i148C61C366B017E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009508 Genomic DNA Translation: AKB37807.1
RefSeqiWP_048170759.1, NZ_CP009508.1

Genome annotation databases

EnsemblBacteriaiAKB37807; AKB37807; MSSAC_3217
GeneIDi24872901
KEGGimsj:MSSAC_3217
PATRICifig|1434118.4.peg.4164

Similar proteinsi

Entry informationi

Entry nameiA0A0E3PQZ1_9EURY
AccessioniPrimary (citable) accession number: A0A0E3PQZ1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 24, 2015
Last sequence update: June 24, 2015
Last modified: January 31, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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