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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza rufipogon (Brownbeard rice) (Asian wild rice)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza rufipogon (Brownbeard rice) (Asian wild rice)Imported
Taxonomic identifieri4529 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000008022 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500236937624 – 1068Sequence analysisAdd BLAST1045

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini108 – 479RNA_pol_Rpb2_1InterPro annotationAdd BLAST372
Domaini257 – 430RNA_pol_Rpb2_2InterPro annotationAdd BLAST174
Domaini591 – 612RNA_pol_Rpb2_5InterPro annotationAdd BLAST22
Domaini614 – 972RNA_pol_Rpb2_6InterPro annotationAdd BLAST359
Domaini974 – 1064RNA_pol_Rpb2_7InterPro annotationAdd BLAST91

Keywords - Domaini

SignalSequence analysis

Family and domain databases

CDDicd00653 RNA_pol_B_RPB2, 1 hit
Gene3Di2.40.270.10, 2 hits
2.40.50.150, 2 hits
3.90.1110.10, 1 hit
InterProiView protein in InterPro
IPR015712 DNA-dir_RNA_pol_su2
IPR007120 DNA-dir_RNAP_su2_dom
IPR037033 DNA-dir_RNAP_su2_hyb_sf
IPR007121 RNA_pol_bsu_CS
IPR007644 RNA_pol_bsu_protrusion
IPR007642 RNA_pol_Rpb2_2
IPR037034 RNA_pol_Rpb2_2_sf
IPR007647 RNA_pol_Rpb2_5
IPR007641 RNA_pol_Rpb2_7
IPR014724 RNA_pol_RPB2_OB-fold
PANTHERiPTHR20856 PTHR20856, 4 hits
PfamiView protein in Pfam
PF04563 RNA_pol_Rpb2_1, 1 hit
PF04561 RNA_pol_Rpb2_2, 1 hit
PF04567 RNA_pol_Rpb2_5, 1 hit
PF00562 RNA_pol_Rpb2_6, 1 hit
PF04560 RNA_pol_Rpb2_7, 1 hit
PROSITEiView protein in PROSITE
PS01166 RNA_POL_BETA, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0E0NWA9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFCCISTVPL FPLFFWLLSF RYAPPPPPPP PPPPSHSHSH FHPIQSAAVT
60 70 80 90 100
TVAAAVDDDM ERTEEEEAPA AKDPNASLPS PTYRSLAAPV TKPVDKFALL
110 120 130 140 150
PAFLKVRGLV KEHIDSFNYF ITKGIRNIVK ANNRIEARNN PSIFLRYNSV
160 170 180 190 200
RVGVPSVQVQ YIAEKITPHF CRLTDRTYSA PVLADIEYTV GKQYELKRKP
210 220 230 240 250
NFIIGYLPIM LRSHACVLNG KDEAELARYG ECPLDPGGYF IVKGTEKVIL
260 270 280 290 300
IQEQLSKNRI IIDTDSKGRV IASVTSSTHE IKSKTVIFME KEKIYLQLNQ
310 320 330 340 350
FTKPIPIIVV MKAMGMESDQ EVAQMVGRDP RYGDLLYPSI QECAFERIYT
360 370 380 390 400
QKQALQYMDD KVMYPGAGNQ KEGRSKSILR DVFVAHVPVE SGNFRPKCIY
410 420 430 440 450
TAVMLRRMMD AILNADTFDD KDYVGNKRLE LSGQLISLLF EDLFKTMNSN
460 470 480 490 500
AVELMNKTSE KIHSSPLDLS LHIKENIITH GLERAISTGN WDIKRFRMHR
510 520 530 540 550
KGVSQVLSRL SYMASLGYMT RITPQFEKTR KTSGPRALQP SQVWKIYHFC
560 570 580 590 600
LEKKSMHRRF ANAMRKLRRS GIIGEFVSIF VNEKQDGIRS FDDFLRDGLI
610 620 630 640 650
EYLDVNEENN ALLFRADSLL YLLVYAQRPL LTTKTIELVG YDKLGAGQNA
660 670 680 690 700
TVAVMSYSGY DIEDAIVMNK SSLDRGFGRC IAMKKYTVTK EKYEGGYSDR
710 720 730 740 750
IVKPQRDKDG ALLKQNMRAL DEDGFAAPGL IIRNHDIYVN KQTPRNTKRD
760 770 780 790 800
SGAHLTDRDY KDSPAVYKGV DGETTVVDRV MLCSDTDEKL IIKCIIRHTR
810 820 830 840 850
RPEVGDKFSS RHGQKGVCGT IVQQEDFPFS ERGICPDLIM NPHGFPSRMT
860 870 880 890 900
IGKMIELLGG KAGVSCGQFH YGSAFGEPSG NADKVEDISR TLVKHGFSYN
910 920 930 940 950
GKDLLYSDRY FKTVPKSLFC LSGILGHPCQ AYVFMGPIYY QKLKHMVLDK
960 970 980 990 1000
MHARASGPRV LLTRQPTEGR SRDGGLRLGE MERDCLIAYG ASMLIFERLL
1010 1020 1030 1040 1050
ISSDPYQVQV CRKCGLLGYY NHKLKASYCS MCKNGENMAK MRMPYACKLL
1060
FQELQAMNVV PRLKLTEG
Length:1,068
Mass (Da):120,815
Last modified:May 27, 2015 - v1
Checksum:iF60A9374CA3A984C
GO

Genome annotation databases

EnsemblPlantsiORUFI03G21430.2; ORUFI03G21430.2; ORUFI03G21430
GrameneiORUFI03G21430.2; ORUFI03G21430.2; ORUFI03G21430

Similar proteinsi

Entry informationi

Entry nameiA0A0E0NWA9_ORYRU
AccessioniPrimary (citable) accession number: A0A0E0NWA9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 27, 2015
Last sequence update: May 27, 2015
Last modified: February 28, 2018
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health