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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza rufipogon (Brownbeard rice) (Asian wild rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri117 – 143C3H1-typePROSITE-ProRule annotationAdd BLAST27
Zinc fingeri151 – 175C3H1-typePROSITE-ProRule annotationAdd BLAST25

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza rufipogon (Brownbeard rice) (Asian wild rice)Imported
Taxonomic identifieri4529 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000008022 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

ProteinModelPortaliA0A0E0MSJ1.
SMRiA0A0E0MSJ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini117 – 143C3H1-typeInterPro annotationAdd BLAST27
Domaini151 – 175C3H1-typeInterPro annotationAdd BLAST25

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri117 – 143C3H1-typePROSITE-ProRule annotationAdd BLAST27
Zinc fingeri151 – 175C3H1-typePROSITE-ProRule annotationAdd BLAST25

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

OMAiWSYPASS.

Family and domain databases

Gene3Di4.10.1000.10. 2 hits.
InterProiView protein in InterPro
IPR000571. Znf_CCCH.
IPR036855. Znf_CCCH_sf.
PfamiView protein in Pfam
PF00642. zf-CCCH. 1 hit.
SMARTiView protein in SMART
SM00356. ZnF_C3H1. 2 hits.
PROSITEiView protein in PROSITE
PS50103. ZF_C3H1. 2 hits.

Sequencei

Sequence statusi: Complete.

A0A0E0MSJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMMMGEGVSS VPPWSHLPVS GVDVLGGGGG GGDEMTPYVI AALRDYLPAN
60 70 80 90 100
DVGVGADEEE EAAAMAAAVD AYACDEFRMY EFKVRRCARG RSHDWTECPF
110 120 130 140 150
AHPGEKARRR DPRKYHYSGT ACPDFRKGGC KRGDACEYAH GVFECWLHPA
160 170 180 190 200
RYRTQPCKDG TACRRRVCFF AHTPDQLRVL PAQQSSPRSV ASSPLAESYD
210 220 230 240 250
GSPLRRQAFE SYLTKTIMSS SPTSTLMSPP KSPPSESPPL SPDGAAAIRR
260 270 280 290 300
GSWPGVGSPV NDVLASFRQL RLNKVKSSPS GGWSYPSSSA VYGSPKAATG
310 320 330 340 350
LYSLPTTPLA STATVTTASS FMPNLEPLDL GLIGDEEPVQ RVESGRALRE
360 370 380
KVFERLSRDG AISGDATAFA TAGVGLDVDW VSDLIN
Length:386
Mass (Da):41,423
Last modified:May 27, 2015 - v1
Checksum:i0244BD287AA5A4C2
GO

Genome annotation databases

EnsemblPlantsiORUFI01G06440.1; ORUFI01G06440.1; ORUFI01G06440.
GrameneiORUFI01G06440.1; ORUFI01G06440.1; ORUFI01G06440.

Similar proteinsi

Entry informationi

Entry nameiA0A0E0MSJ1_ORYRU
AccessioniPrimary (citable) accession number: A0A0E0MSJ1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 27, 2015
Last sequence update: May 27, 2015
Last modified: October 25, 2017
This is version 16 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported