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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza punctata (Red rice)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza punctata (Red rice)Imported
Taxonomic identifieri4537 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000026962 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 42CCHC-typeInterPro annotationAdd BLAST16
Domaini105 – 161HTH myb-typeInterPro annotationAdd BLAST57

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

OMAiIRQTNVN
OrthoDBiEOG09360KWO

Family and domain databases

CDDicd00167 SANT, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017930 Myb_dom
IPR006447 Myb_dom_plants
IPR001005 SANT/Myb
IPR001878 Znf_CCHC
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 1 hit
SMARTiView protein in SMART
SM00717 SANT, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
TIGRFAMsiTIGR01557 myb_SHAQKYF, 1 hit
PROSITEiView protein in PROSITE
PS51294 HTH_MYB, 1 hit
PS50158 ZF_CCHC, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0E0LR56-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRDGAPPAA PPPGGAGGGG GGADGPRRCS QCGNHGHNAR TCTARGPVKL
60 70 80 90 100
FGVRIGDKPP PAAAAGGGGG GGMRKSASMG SLAQLAEGSA GGREEGYGSD
110 120 130 140 150
GNDDKRRKRG EAWSEEEHKK FLLGLSKLGK GDWRGISRNY VGSRTPTQVA
160 170 180 190 200
SHAQKYFIRQ TSAHRRKRRS SLFDMVIDDS DDQPLSGTSS QEVEVEENLE
210 220 230 240 250
DAQLVTAPVI PPAPVPMLSS SSVPPPVPAM APVAPGPVLT SASAALPVSA
260 270 280 290 300
VAPQPDEKEP VASGSNTRET GIAIPEIMPP YGYPMMLPPY YPPAFVPMPY
310 320 330 340 350
YGYVPVFYAP PGAVQATHEV VKPVAVHSKP PVHIDELYSM SELSLKGETS
360 370 380 390
VKNGTPNSPL PPRPIGRPDR QSAFHGKGPA DGSSNGLIPA K
Length:391
Mass (Da):40,664
Last modified:May 27, 2015 - v1
Checksum:iF5B75779262739C2
GO

Genome annotation databases

EnsemblPlantsiOPUNC08G02520.1; OPUNC08G02520.1; OPUNC08G02520
GrameneiOPUNC08G02520.1; OPUNC08G02520.1; OPUNC08G02520

Similar proteinsi

Entry informationi

Entry nameiA0A0E0LR56_ORYPU
AccessioniPrimary (citable) accession number: A0A0E0LR56
Entry historyiIntegrated into UniProtKB/TrEMBL: May 27, 2015
Last sequence update: May 27, 2015
Last modified: November 22, 2017
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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