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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza barthii
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza barthiiImported
Taxonomic identifieri65489 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000026960 Componenti: Chromosome 3

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini49 – 420RNA_pol_Rpb2_1InterPro annotationAdd BLAST372
Domaini198 – 371RNA_pol_Rpb2_2InterPro annotationAdd BLAST174
Domaini532 – 553RNA_pol_Rpb2_5InterPro annotationAdd BLAST22
Domaini555 – 913RNA_pol_Rpb2_6InterPro annotationAdd BLAST359
Domaini915 – 1005RNA_pol_Rpb2_7InterPro annotationAdd BLAST91

Family and domain databases

CDDicd00653. RNA_pol_B_RPB2. 1 hit.
Gene3Di2.40.270.10. 2 hits.
InterProiView protein in InterPro
IPR015712. DNA-dir_RNA_pol_su2.
IPR007120. DNA-dir_RNAP_su2_dom.
IPR037033. DNA-dir_RNAP_su2_hyb_sf.
IPR007121. RNA_pol_bsu_CS.
IPR007644. RNA_pol_bsu_protrusion.
IPR007642. RNA_pol_Rpb2_2.
IPR007647. RNA_pol_Rpb2_5.
IPR007641. RNA_pol_Rpb2_7.
PANTHERiPTHR20856. PTHR20856. 4 hits.
PfamiView protein in Pfam
PF04563. RNA_pol_Rpb2_1. 1 hit.
PF04561. RNA_pol_Rpb2_2. 1 hit.
PF04567. RNA_pol_Rpb2_5. 1 hit.
PF00562. RNA_pol_Rpb2_6. 1 hit.
PF04560. RNA_pol_Rpb2_7. 1 hit.
PROSITEiView protein in PROSITE
PS01166. RNA_POL_BETA. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0D3FJL3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERTEEEEAP AAKDPNASLP SPTYRSLAAP VTKPVDKFAL LPAFLKVRGL
60 70 80 90 100
VKEHIDSFNY FITKGIRNIV KANNRIEARN NPSIFLRYNS VRVGVPSVQV
110 120 130 140 150
QYIAEKITPH FCRLTDRTYS APVLADIEYT VGKQYELKRK PNFIIGYLPI
160 170 180 190 200
MLRSHACVLN GKDEAELARY GECPLDPGGY FIVKGTEKVI LIQEQLSKNR
210 220 230 240 250
IIIDTDSKGR VIASVTSSTH EIKSKTVIFM EKEKIYLQLN QFTKPIPIIV
260 270 280 290 300
VMKAMGMESD QEVAQMVGRD PRYGDLLYPS IQECAFERIY TQKQALQYMD
310 320 330 340 350
DKVMYPGAGN QKEGRSKSIL RDVFVAHVPV ESGNFRPKCI YTAVMLRRMM
360 370 380 390 400
DAILNADTFD DKDYVGNKRL ELSGQLISLL FEDLFKTMNS NAVELMNKTS
410 420 430 440 450
EKIHSSPLDL SLHIKENIIT HGLERAISTG NWDIKRFRMH RKGVSQVLSR
460 470 480 490 500
LSYMASLGYM TRITPQFEKT RKTSGPRALQ PSQVWKIYHF CLEKKSMHRR
510 520 530 540 550
FANAMRKLRR SGIIGEFVSI FVNEKQDGIR SFDDFLRDGL IEYLDVNEEN
560 570 580 590 600
NALLFRADSL LYLLVYAQRP LLTTKTIELV GYDKLGAGQN ATVAVMSYSG
610 620 630 640 650
YDIEDAIVMN KSSLDRGFGR CIAMKKYTVT KEKYEGGYSD RIVKPQRDKD
660 670 680 690 700
GALLKQNMRA LDEDGFAAPG LIIRNHDIYV NKQTPRNTKR DSGAHLTDRD
710 720 730 740 750
YKDSPAVYKG VDGETTVVDR VMLCSDTDEK LIIKCIIRHT RRPEVGDKFS
760 770 780 790 800
SRHGQKGVCG TIVQQEDFPF SERGICPDLI MNPHGFPSRM TIGKMIELLG
810 820 830 840 850
GKAGVSCGQF HYGSAFGEPS GNADKVEDIS RTLVKHGFSY NGKDLLYSDR
860 870 880 890 900
YFKTVPKSLF CLSGILGHPC QAYVFMGPIY YQKLKHMVLD KMHARASGPR
910 920 930 940 950
VLLTRQPTEG RSRDGGLRLG EMERDCLIAY GASMLIFERL LISSDPYQVQ
960 970 980 990 1000
VCRKCGLLGY YNHKLKASYC SMCKNGENMA KMRMPYACKL LFQELQAMNV

VPRLKLTEG
Length:1,009
Mass (Da):114,379
Last modified:April 29, 2015 - v1
Checksum:i70C31301D6E84137
GO

Genome annotation databases

EnsemblPlantsiOBART03G20820.3; OBART03G20820.3; OBART03G20820.
GrameneiOBART03G20820.3; OBART03G20820.3; OBART03G20820.

Similar proteinsi

Entry informationi

Entry nameiA0A0D3FJL3_9ORYZ
AccessioniPrimary (citable) accession number: A0A0D3FJL3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: November 22, 2017
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported