Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

RNA polymerase II transcription factor B subunit 2

Gene

MNEG_1330

Organism
Monoraphidium neglectum
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcription factor B subunit 2UniRule annotation
Gene namesi
ORF Names:MNEG_1330Imported
OrganismiMonoraphidium neglectumImported
Taxonomic identifieri145388 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeSphaeroplealesSelenastraceaeMonoraphidium
Proteomesi
  • UP000054498 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0D2K8Y6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQADAAAAHP PALQSLNLAS YIASLAPEAR SQLYSSPWTC QAVFRALEPL
60 70 80 90 100
GQQYVLRLLY APEPLPDGFV RNWAKSDTTS AKKHEVALRL LQELSLLAAE
110 120 130 140 150
ARGGTTTWAL HEVFKEHLRS ALAGSTHGGG MVDAVVLSVM PGQEAIAEYA
160 170 180 190 200
VKQWEGVLTF LLDPTRQAPP SMPVGLRHEP LDVERLVAAA GLIKEPDRAL
210 220 230 240 250
TGAGFRFLLM DTNGQAWTLL RDYIRSAEQA SAAQLSSVLS FLMQLGFRQV
260 270 280 290 300
GRPYALAGLS PLEQRIAAHM AQLGLLYTFK AEGGTYFCPT ALASTLCGGG
310 320 330 340 350
AAAAAALSPS GLSAGVGGGG YVIVETNFRI YAYTSSRIQV RVLEEFCRLD
360 370 380 390 400
CALPNLFVGT LTRDSVQHAL GKGMTADDII GFLQSHAHPQ VAARVPSVPE
410 420 430 440 450
TVQDQIRLWE RETQRVDMSP AFWYSNFEDV TLYERSRAFA QQRGVLLWDS
460 470 480
AERQQMVVTQ QGHTLVKEHI KLLKAQAAMG TAL
Length:483
Mass (Da):52,459
Last modified:April 29, 2015 - v1
Checksum:i0BAD338486B9D64F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK100349 Genomic DNA. Translation: KIZ06628.1.
RefSeqiXP_013905647.1. XM_014050193.1.

Genome annotation databases

GeneIDi25730748.

Entry informationi

Entry nameiA0A0D2K8Y6_9CHLO
AccessioniPrimary (citable) accession number: A0A0D2K8Y6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: June 7, 2017
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported