Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

RNA polymerase II transcription factor B subunit 2

Gene

UMAG_06296

Organism
Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcription factor B subunit 2UniRule annotation
Gene namesi
ORF Names:UMAG_06296Imported
OrganismiUstilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)Imported
Taxonomic identifieri237631 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaUstilaginomycotinaUstilaginomycetesUstilaginalesUstilaginaceaeUstilago
Proteomesi
  • UP000000561 Componenti: Chromosome 4

Organism-specific databases

EuPathDBiFungiDB:UMAG_06296.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi5270.UM06296P0.

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

KOiK03144.
OMAiYLEQYAH.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.
TIGRFAMsiTIGR00625. tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0D1CUU7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASQRHTPGP GQGLTSTAKG GTNTALAISE HSRAAGIGAE TIDDFLDRQP
60 70 80 90 100
RSVLIRLYQK PASCLAIFRL LPMMARQLIM HMLFLDVPLA ADDFLAWIKK
110 120 130 140 150
EVKNEFDAAV DKLSRLSIIQ LKASAGKQML LLNAGFTEGM RRALTGGGKH
160 170 180 190 200
RSFGVPCDTE DKNAVDVAFL DQYARTKWET ILHYMVGSDN SSTPREPVLY
210 220 230 240 250
LLRRSNLMQP RTASSSNGGL NITSRGFQFL LEDVNTQLWD LLLQYLDMAE
260 270 280 290 300
ERNMDLVEVL AFLFMLGSLE LGRDYSTEEL PETQLHMLED FRDYGLVYQR
310 320 330 340 350
KASSRRFYPT RLATTLTSSA AVPLLSSNGT EQEERGYIIL ETNYRLYAYT
360 370 380 390 400
SNPLRVAVLS LFVTIKARFP NLVVGSITRD SVKSALANGI TAEQIITYLT
410 420 430 440 450
HHAHLQMHRN DPLLPVTVSD QIRLWEREKN RVQQNLGSLF TDFTSQFDFE
460 470 480 490
EVRNYAKQLG VLVWQDEEKR RFFVDEAGNE PVRDYIRRRR A
Length:491
Mass (Da):55,715
Last modified:April 29, 2015 - v1
Checksum:i9570F6A2AD22C3AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM003143 Genomic DNA. Translation: KIS70208.1.
RefSeqiXP_011388300.1. XM_011389998.1.

Genome annotation databases

EnsemblFungiiKIS70208; KIS70208; UMAG_06296.
GeneIDi23565933.
KEGGiuma:UMAG_06296.

Similar proteinsi

Entry informationi

Entry nameiA0A0D1CUU7_USTMA
AccessioniPrimary (citable) accession number: A0A0D1CUU7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: August 30, 2017
This is version 16 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported