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Protein

50S ribosomal protein L22

Gene

rplV

Organism
Arthrobacter sp. SPG23
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.UniRule annotation
This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L22UniRule annotation
Gene namesi
Name:rplVUniRule annotation
ORF Names:TV39_15375Imported
OrganismiArthrobacter sp. SPG23Imported
Taxonomic identifieri1610703 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeArthrobacter
Proteomesi
  • UP000032262 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

SMRiA0A0D1C6G1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL22 family.UniRule annotation

Family and domain databases

CDDicd00336. Ribosomal_L22. 1 hit.
Gene3Di3.90.470.10. 1 hit.
HAMAPiMF_01331_B. Ribosomal_L22_B. 1 hit.
InterProiView protein in InterPro
IPR001063. Ribosomal_L22.
IPR018260. Ribosomal_L22/L17_CS.
IPR036394. Ribosomal_L22/L17_sf.
IPR005727. Ribosomal_L22_bac/chlpt-type.
PANTHERiPTHR13501. PTHR13501. 1 hit.
PfamiView protein in Pfam
PF00237. Ribosomal_L22. 1 hit.
SUPFAMiSSF54843. SSF54843. 1 hit.
TIGRFAMsiTIGR01044. rplV_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00464. RIBOSOMAL_L22. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0D1C6G1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAKAIARHI RVTPMKARRV VNLVRGKQAN EALAILKFAP QAASEPVFKV
60 70 80 90 100
VQSAISNARV LADRDGVAFD EGDLIISEAF VDEGPTMKRF QPRAQGRAFQ
110 120
IKKRTSHITV VVATPEKEEA R
Length:121
Mass (Da):13,364
Last modified:April 29, 2015 - v1
Checksum:i10C7885CD4619538
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JYCN01000022 Genomic DNA. Translation: KIS26646.1.
RefSeqiWP_003803798.1. NZ_JYCN01000022.1.

Genome annotation databases

EnsemblBacteriaiKIS26646; KIS26646; TV39_15375.
PATRICifig|1610703.3.peg.2434.

Similar proteinsi

Entry informationi

Entry nameiA0A0D1C6G1_9MICC
AccessioniPrimary (citable) accession number: A0A0D1C6G1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2015
Last sequence update: April 29, 2015
Last modified: March 28, 2018
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported