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Protein

General transcription factor IIH subunit 4

Gene

EIN_229820

Organism
Entamoeba invadens IP1
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
General transcription factor IIH subunit 4UniRule annotation
Gene namesi
ORF Names:EIN_229820Imported
OrganismiEntamoeba invadens IP1Imported
Taxonomic identifieri370355 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaArchamoebaeEntamoebidaeEntamoeba
Proteomesi
  • UP000014680 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiAmoebaDB:EIN_229820.

Subcellular locationi

A0A0A1U347:
  • Nucleus UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

KOiK03144.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0A1U347-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENILEKDVL KYFQDFPEGA YRVIYQTKWS SSGIFRLLPS LCQSLLLRLV
60 70 80 90 100
FLSSTIDLPT VEKQFTITKQ EIIHVLSLLE SVKIIKKVMI NGKTQFQMNA
110 120 130 140 150
DFQTHLKESI LGPMVPNYVV SDCNFSVKDA LIKKASLNNA VKMFEDFLMK
160 170 180 190 200
LLTFNESHNL PKSAFELFKD LELVNDAGSQ ITRKGYQFLF QETKTQIWIL
210 220 230 240 250
MLSIFGPAQR KRRMGKLINE FFELTYLAPE TCYNADPFTK IYSAAPLILF
260 270 280 290 300
DMMGIIAYSK EKNALVVTPL MSLLRSNALV PSDLVTKPRT ITETNYTVYI
310 320 330 340 350
YTESFFQVKL YSLFIRQNLQ LTNLCVGRIT YDTVTEAFLK GITNEMLVNF
360 370 380 390 400
LQPNLPKNIQ AQIDLWKREL NRLKEVRAVK FRFYEPELEV QKELYHLTKS
410 420 430 440 450
EAEKMKGVVF YKEEELTLFV RYDVAEKIKE FLRRKTREES FIARLRKSES
460 470 480 490 500
DEKKESRSFS SFPQRGISRQ EPSKSISRSE SKSFKDQRSI SRPDTKRPPI
510 520 530
SNPGVNKRLP EPTQIKSVPT KKSYVLSDSD D
Length:531
Mass (Da):61,693
Last modified:February 4, 2015 - v1
Checksum:i4562606AE0BB8F7A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB206756 Genomic DNA. Translation: ELP88449.1.
RefSeqiXP_004255220.1. XM_004255172.1.

Genome annotation databases

EnsemblProtistsiELP88449; ELP88449; EIN_229820.
GeneIDi14887088.
KEGGieiv:EIN_229820.

Entry informationi

Entry nameiA0A0A1U347_ENTIV
AccessioniPrimary (citable) accession number: A0A0A1U347
Entry historyiIntegrated into UniProtKB/TrEMBL: February 4, 2015
Last sequence update: February 4, 2015
Last modified: June 7, 2017
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported