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Protein
Submitted name:

Collagen and calcium-binding EGF domain-containing protein 1

Gene

CCBE1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Collagen and calcium-binding EGF domain-containing protein 1Imported
Gene namesi
Name:CCBE1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 18

Organism-specific databases

EuPathDBiHostDB:ENSG00000183287.13.
HGNCiHGNC:29426. CCBE1.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000183287.

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiA0A0A0MS88.

Expressioni

Gene expression databases

BgeeiENSG00000183287.
ExpressionAtlasiA0A0A0MS88. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliA0A0A0MS88.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini64 – 105EGF-likeInterPro annotationAdd BLAST42

Keywords - Domaini

EGF-like domainPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IRWI. Eukaryota.
ENOG4111SKA. LUCA.
GeneTreeiENSGT00390000014907.

Family and domain databases

Gene3Di2.160.20.50. 1 hit.
InterProiView protein in InterPro
IPR008160. Collagen.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR016133. Insect_cyst_antifreeze_prot.
PfamiView protein in Pfam
PF01391. Collagen. 1 hit.
PF07645. EGF_CA. 1 hit.
SMARTiView protein in SMART
SM00181. EGF. 2 hits.
SM00179. EGF_CA. 2 hits.
PROSITEiView protein in PROSITE
PS00010. ASX_HYDROXYL. 1 hit.
PS01186. EGF_2. 1 hit.
PS50026. EGF_3. 1 hit.
PS01187. EGF_CA. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A0A0MS88-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
RKKCCKGYKF VLGQCIPEDY DVCAEAPCEQ QCTDNFGRVL CTCYPGYRYD
60 70 80 90 100
RERHRKREKP YCLDIDECAS SNGTLCAHIC INTLGSYRCE CREGYIREDD
110 120 130 140 150
GKTCTRGDKY PNDTGHEKSE NMVKAGTCCA TCKEFYQMKQ TVLQLKQKIA
160 170 180 190 200
LLPNNAADLG KYITGDKVLA SNTYLPGPPG LPGGQGPPGS PGPKGSPGFP
210 220 230 240 250
GMPGPPGQPG PRGSMGPMGP SPDLSHIKQG RRGPVGPPGA PGRDGSKGER
260 270 280 290 300
GAPGPRGSPG PPGSFDFLLL MLADIRNDIT ELQEKVFGHR THSSAEEFPL
310 320 330
PQEFPSYPEA MDLGSGDDHP RRTETRDLRA PRDFYP
Length:336
Mass (Da):36,544
Last modified:January 7, 2015 - v1
Checksum:i0CF642B07565CBB7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010776 Genomic DNA. No translation available.
AC016229 Genomic DNA. No translation available.
AC090213 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000398179; ENSP00000381241; ENSG00000183287.
UCSCiuc060prl.1. human.

Similar proteinsi

Entry informationi

Entry nameiA0A0A0MS88_HUMAN
AccessioniPrimary (citable) accession number: A0A0A0MS88
Entry historyiIntegrated into UniProtKB/TrEMBL: January 7, 2015
Last sequence update: January 7, 2015
Last modified: October 25, 2017
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported