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Protein
Submitted name:

Estrogen receptor beta

Gene

N309_07541

Organism
Tinamus guttatus (White-throated tinamou)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi171 – 246Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorUniRule annotationSAAS annotationImported
Biological processTranscription, Transcription regulationUniRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Estrogen receptor betaImported
Gene namesi
ORF Names:N309_07541Imported
OrganismiTinamus guttatus (White-throated tinamou)Imported
Taxonomic identifieri94827 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesPalaeognathaeTinamiformesTinamidaeTinamus
Proteomesi
  • UP000053641 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini171 – 246Nuclear receptorInterPro annotationAdd BLAST76

Sequence similaritiesi

Belongs to the nuclear hormone receptor family. NR3 subfamily.UniRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProiView protein in InterPro
IPR028355. ER-beta/gamma.
IPR021064. Estrogen_rcpt_beta_N.
IPR035500. NHR_like_dom_sf.
IPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001723. Nuclear_hrmn_rcpt.
IPR024178. Oest_rcpt/oest-rel_rcp.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
PfamiView protein in Pfam
PF12497. ERbeta_N. 1 hit.
PF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
PIRSFiPIRSF500102. ER-b. 1 hit.
PIRSF002527. ER-like_NR. 1 hit.
PRINTSiPR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTiView protein in SMART
SM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
SUPFAMiSSF48508. SSF48508. 2 hits.
PROSITEiView protein in PROSITE
PS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A099ZMK2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLCASSHKD FSQLLPLQDI GCNKTEIKNS PAGIGSPVPY SCTQSVLAVE
60 70 80 90 100
HSPVYIPSSY MESRHEYSSV AFCSPAMMNY NFTSNFGDSE NATVRQTSSP
110 120 130 140 150
GVLWSGPGHL SPLALHCQSS ILYTEQPKSP WCEARPVEPV LPGNRETLKR
160 170 180 190 200
KTNGSDCTSP VANNPGSKRD AHFCAVCSDY ASGYHYGVWS CEGCKAFFKR
210 220 230 240 250
SIQGHNDYIC PATNQCTIDK NRRKSCQACR LRKCYEVGMM KCGSRRERCG
260 270 280 290 300
YRILRRHRNS EDQMHCIGKT KKYSETATRV KEILLSTVSP EQFVLTLLEA
310 320 330 340 350
EPPNVLVSRP SKPFTEASMM MSLTKLADKE LVHMIGWAKK IPGFVDLSLY
360 370 380 390 400
DQVRLLESCW MEVLMIGLMW RSIDHPGKLI FAPDLVLDRD EGKCVEGILE
410 420 430 440 450
IFDMLLAMTS RFRELKLQHK EYLCVKAMIL LNSSMFPLSA EEPESNRKLH
460 470 480 490 500
HLLNVVTDAL VWVIAKSGIP SQQQTTRLAN LLMLLSHVRH ASNKGMEHLL
510 520 530 540
SMKCKNVVPV YDLLLEMLNA HTLRGQRKSP ITSPEFGQLE QMEPGDGL
Length:548
Mass (Da):61,534
Last modified:January 7, 2015 - v1
Checksum:i5323D6516DDEE809
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL896004 Genomic DNA. Translation: KGL83106.1.
RefSeqiXP_010221463.1. XM_010223161.1.

Genome annotation databases

GeneIDi104575812.

Similar proteinsi

Entry informationi

Entry nameiA0A099ZMK2_TINGU
AccessioniPrimary (citable) accession number: A0A099ZMK2
Entry historyiIntegrated into UniProtKB/TrEMBL: January 7, 2015
Last sequence update: January 7, 2015
Last modified: January 31, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported