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Protein
Submitted name:

Nuclear pore complex protein Nup50

Gene

N309_06400

Organism
Tinamus guttatus (White-throated tinamou)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear pore complex protein Nup50Imported
Gene namesi
ORF Names:N309_06400Imported
OrganismiTinamus guttatus (White-throated tinamou)Imported
Taxonomic identifieri94827 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesPalaeognathaeTinamiformesTinamidaeTinamus
Proteomesi
  • UP000053641 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini313 – 470RanBD1InterPro annotationAdd BLAST158

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiView protein in InterPro
IPR015007. NUP2/50/61.
IPR011993. PH-like_dom_sf.
IPR000156. Ran_bind_dom.
PfamiView protein in Pfam
PF08911. NUP50. 1 hit.
PF00638. Ran_BP1. 1 hit.
SMARTiView protein in SMART
SM00160. RanBD. 1 hit.
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiView protein in PROSITE
PS50196. RANBD1. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A099Z2V6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRIAEKEL TDRNWDQEDE AEEVGTFSVA SEEVLKNRAI KKAKRRNVGT
60 70 80 90 100
ESESGGAFKG FKGFILPSGK AGGGFSGFGN GAGIKPLEGL SNGSSSVSST
110 120 130 140 150
PSFSSLKTTS ETQMAFGSTA SNGPTASAFT EKKAASPKVN GGSQASSSGH
160 170 180 190 200
SQSQMCSSGI YHKQLAALNC SVRDWIVKHV NTNPLCDLTP IFRDYEKYLA
210 220 230 240 250
NIEQQHGSNS DSGSENEVSK TPSTQSVSTF GNSKPQQGST FLFNSKKNED
260 270 280 290 300
TSDKKTESAS EKRDPAAGVG STVSFNFGKS IDSSVLGSLG SGQLSSFSFS
310 320 330 340 350
PGNSGLFGKD ANQAKPVSAV PTNILEAQTE SGSSDDKGGE EEEEEPPKVV
360 370 380 390 400
VNEIKEDDAF YSKKCKLFYK KDNEFKEKGV GTLHLKPAGN EKTQLLVRAD
410 420 430 440 450
TNLGNILLNV LIPPKMPCTR TGKNNVLIVC VPNPPIDEKN PTGPVTMLIR
460 470
VKTSEDADEL HKILLEKKEA
Length:470
Mass (Da):50,074
Last modified:January 7, 2015 - v1
Checksum:i75EAA5A974FEFA3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL887938 Genomic DNA. Translation: KGL75423.1.
RefSeqiXP_010210234.1. XM_010211932.1.

Genome annotation databases

GeneIDi104565258.

Similar proteinsi

Entry informationi

Entry nameiA0A099Z2V6_TINGU
AccessioniPrimary (citable) accession number: A0A099Z2V6
Entry historyiIntegrated into UniProtKB/TrEMBL: January 7, 2015
Last sequence update: January 7, 2015
Last modified: November 22, 2017
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported